RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 WDR70Q9NW82 654 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 ABCC1P33527 1531 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 BACH1O14867 736 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 PRIMPOLQ96LW4 560 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 LRSAM1Q6UWE0 723 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 CEP112Q8N8E3 955 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 RAB3GAP1Q15042 981 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 ANO6Q4KMQ2 910 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 SELENOOQ9BVL4 669 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 RNMTO43148 476 aaKnown RBP15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 PARP1P09874 1014 aaKnown RBP15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 ARID5AQ03989 594 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 TTC41PQ6P2S7 1318 aa15.86■□□□□ 0.13
RAPGEF3-205ENST00000449771 SPAG1Q07617 926 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 RASAL2Q9UJF2 1139 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 UFL1O94874 794 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 GCP02774 474 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 CKAP4Q07065 602 aaKnown RBP15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 CEP135Q66GS9 1140 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 CCDC155Q8N6L0 562 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 HSF2BPO75031 334 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 GNA11P29992 359 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 ZSCAN23Q3MJ62 389 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 GSTA5Q7RTV2 222 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 DENND2AQ9ULE3 1009 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 PRPHP41219 470 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 MNAT1P51948 309 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 APOBRQ0VD83 1088 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 SH2D4AQ9H788 454 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 MAP3K1Q13233 1512 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 BICC1Q9H694 974 aaKnown RBP15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 PICK1Q9NRD5 415 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
RAPGEF3-205ENST00000449771 TTC6Q86TZ1 520 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 POLKQ9UBT6 870 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 ZNF518AQ6AHZ1 1483 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 PTGS1P23219 599 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 RAPGEF6Q8TEU7 1601 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 CCDC50Q8IVM0 306 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 VGLL3A8MV65 326 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 HOXC9P31274 260 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 USP48Q86UV5 1035 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 IQCGQ9H095 443 aaKnown RBP15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 ZNF408Q9H9D4 720 aa15.84■□□□□ 0.13
RAPGEF3-205ENST00000449771 KIF4AO95239 1232 aa15.83■□□□□ 0.13
RAPGEF3-205ENST00000449771 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.13
RAPGEF3-205ENST00000449771 TEX11Q8IYF3 940 aa15.83■□□□□ 0.13
RAPGEF3-205ENST00000449771 KRT222Q8N1A0 295 aa15.83■□□□□ 0.13
RAPGEF3-205ENST00000449771 SPECC1LQ69YQ0 1117 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 RXRAP19793 462 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 HS2ST1Q7LGA3 356 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 AOPEPQ8N6M6 819 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 SPTLC2O15270 562 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 TERF1P54274 439 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 ZFP91Q96JP5 570 aaPredicted RBP15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 ZKSCAN3Q9BRR0 538 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 NPATQ14207 1427 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
RAPGEF3-205ENST00000449771 PLIN2Q99541 437 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 TRPM2O94759 1503 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 MSANTD4Q8NCY6 345 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 MBD4O95243 580 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 F13A1P00488 732 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 EYA1Q99502 592 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 PAIP2Q9BPZ3 127 aaKnown RBP15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 DTHD1Q6ZMT9 781 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 GPCPD1Q9NPB8 672 aa15.82■□□□□ 0.12
RAPGEF3-205ENST00000449771 CREB3L3Q68CJ9 461 aa15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 LMBR1Q8WVP7 490 aa15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 CCDC171Q6TFL3 1326 aa15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 APBB1IPQ7Z5R6 666 aaPredicted RBP15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 NAP1L4Q99733 375 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 CEP83Q9Y592 693 aa15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 DNM1Q05193 864 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 NEK11Q8NG66 645 aa15.81■□□□□ 0.12
RAPGEF3-205ENST00000449771 TACC1O75410 805 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 C6orf163Q5TEZ5 329 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 IP6K1Q92551 441 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 CDCA7Q9BWT1 371 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 KLHL40Q2TBA0 621 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 YTHDC2Q9H6S0 1430 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 ITGA6P23229 1130 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 PLCB3Q01970 1234 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 DACT1Q9NYF0 836 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 ITSN2Q9NZM3 1697 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 UBXN1Q04323 297 aa15.8■□□□□ 0.12
RAPGEF3-205ENST00000449771 GGA1Q9UJY5 639 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms