RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 SCARF1Q14162 830 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 COA1Q9GZY4 146 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 ZBTB12Q9Y330 459 aaPredicted RBP12.07□□□□□ -0.48
CCDC171-203ENST00000449575 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 SHTN1A0MZ66 631 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 IL1R1P14778 569 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 PDE4AP27815 886 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 GTF2IP78347 998 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 ZNF804AQ7Z570 1209 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 TDRD7Q8NHU6 1098 aaKnown RBP12.07□□□□□ -0.48
CCDC171-203ENST00000449575 PKNOX2Q96KN3 472 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 GPR108Q9NPR9 543 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 GJA3Q9Y6H8 435 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 NDUFB9Q9Y6M9 179 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 VPS37DQ86XT2 251 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
CCDC171-203ENST00000449575 GRIK5Q16478 980 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 CAVIN4Q5BKX8 364 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 CLASRPQ8N2M8 674 aaKnown RBP12.06□□□□□ -0.48
CCDC171-203ENST00000449575 CERS5Q8N5B7 392 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 LNPKQ9C0E8 428 aa12.06□□□□□ -0.48
CCDC171-203ENST00000449575 EIF6P56537 245 aaKnown RBP12.05□□□□□ -0.48
CCDC171-203ENST00000449575 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-203ENST00000449575 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 TTLL5Q6EMB2 1281 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 CIAPIN1Q6FI81 312 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 GCC1Q96CN9 775 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 MCAMP43121 646 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 DACT2Q5SW24 774 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 SNRKQ9NRH2 765 aa12.05□□□□□ -0.48
CCDC171-203ENST00000449575 KDM2BQ8NHM5 1336 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 POLR2AP24928 1970 aaKnown RBP12.04□□□□□ -0.48
CCDC171-203ENST00000449575 POTECB2RU33 542 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 YY1P25490 414 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 FRAT2O75474 233 aaPredicted RBP12.04□□□□□ -0.48
CCDC171-203ENST00000449575 VIL1P09327 827 aaKnown RBP12.04□□□□□ -0.48
CCDC171-203ENST00000449575 SCNN1DP51172 638 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
CCDC171-203ENST00000449575 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
CCDC171-203ENST00000449575 GMPSP49915 693 aaPredicted RBP12.03□□□□□ -0.48
CCDC171-203ENST00000449575 GPC2Q8N158 579 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 NMRK2Q9NPI5 230 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 EGFRP00533 1210 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 ARID4AP29374 1257 aaPredicted RBP12.03□□□□□ -0.48
CCDC171-203ENST00000449575 TBC1D9Q6ZT07 1266 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 SCN4AP35499 1836 aa12.03□□□□□ -0.48
CCDC171-203ENST00000449575 ZC3H4Q9UPT8 1303 aaKnown RBP12.03□□□□□ -0.48
CCDC171-203ENST00000449575 MYH2Q9UKX2 1941 aa12.02□□□□□ -0.48
CCDC171-203ENST00000449575 F8W031 263 aaPredicted RBP12.02□□□□□ -0.49
CCDC171-203ENST00000449575 EPS15P42566 896 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 NUCB1Q02818 461 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 TTC39AQ5SRH9 613 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 STRIP1Q5VSL9 837 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 EDC3Q96F86 508 aaKnown RBP12.02□□□□□ -0.49
CCDC171-203ENST00000449575 GMLQ99445 158 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 SALL3Q9BXA9 1300 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 MFSD14BQ5SR56 506 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 DPY19L2Q6NUT2 758 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
CCDC171-203ENST00000449575 CHD1LQ86WJ1 897 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 KIAA0825Q8IV33 1275 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 PCDHAC2Q9Y5I4 1007 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 FAM205AQ6ZU69 1335 aa12.02□□□□□ -0.49
CCDC171-203ENST00000449575 DOCK2Q92608 1830 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 RRAGCQ9HB90 399 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 ZAP70P43403 619 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 TNIP1Q15025 636 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
CCDC171-203ENST00000449575 MYH7P12883 1935 aa12□□□□□ -0.49
CCDC171-203ENST00000449575 PRDX5P30044 214 aa12□□□□□ -0.49
CCDC171-203ENST00000449575 ZNF784Q8NCA9 323 aaPredicted RBP12□□□□□ -0.49
CCDC171-203ENST00000449575 GNL3LQ9NVN8 582 aaKnown RBP12□□□□□ -0.49
CCDC171-203ENST00000449575 CYP2E1P05181 493 aaPredicted RBP12□□□□□ -0.49
CCDC171-203ENST00000449575 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
CCDC171-203ENST00000449575 GPRC5DQ9NZD1 345 aa12□□□□□ -0.49
CCDC171-203ENST00000449575 CNOT7Q9UIV1 285 aaKnown RBP12□□□□□ -0.49
CCDC171-203ENST00000449575 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
CCDC171-203ENST00000449575 AOX1Q06278 1338 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 L3MBTL3Q96JM7 780 aaPredicted RBP11.99□□□□□ -0.49
CCDC171-203ENST00000449575 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
CCDC171-203ENST00000449575 AK9Q5TCS8 1911 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms