RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 MBD4O95243 580 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 CALM1P0DP23 149 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 CALM2P0DP24 149 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 CALM3P0DP25 149 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 ABCA8O94911 1581 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
CTC1-202ENST00000449476 BRD1O95696 1058 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 PSMA7O14818 248 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 LTKP29376 864 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 APPBP2Q92624 585 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 LLPHQ9BRT6 129 aaKnown RBP11.88□□□□□ -0.51
CTC1-202ENST00000449476 JADE2Q9NQC1 790 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
CTC1-202ENST00000449476 B4E1Z4 1266 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 CALML3P27482 149 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 LRRC27Q9C0I9 530 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 RTL9Q8NET4 1388 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 KCNQ3O43525 872 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 ITGA6P23229 1130 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 STX17P56962 302 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 MCM9Q9NXL9 1143 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.87□□□□□ -0.51
CTC1-202ENST00000449476 V9GYY5 206 aaPredicted RBP11.87□□□□□ -0.51
CTC1-202ENST00000449476 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
CTC1-202ENST00000449476 TM6SF1Q9BZW5 370 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 HSPA2P54652 639 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 NAPAP54920 295 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
CTC1-202ENST00000449476 CABP5Q9NP86 173 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 MYO5CQ9NQX4 1742 aa11.87□□□□□ -0.51
CTC1-202ENST00000449476 GIGYF1O75420 1035 aaPredicted RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 POTEJP0CG39 1038 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 TPTE2Q6XPS3 522 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 TRMT1LQ7Z2T5 733 aaKnown RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 TMCO5BA8MYB1 307 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 GPAA1O43292 621 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 MYO1BO43795 1136 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 CETN2P41208 172 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 NOP2P46087 812 aaKnown RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 EDC3Q96F86 508 aaKnown RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 PALD1Q9ULE6 856 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 CYLC1P35663 651 aaPredicted RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 KRT2P35908 639 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 ASIC1P78348 528 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 EHBP1Q8NDI1 1231 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 NEO1Q92859 1461 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 SYNMO15061 1565 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 CETN1Q12798 172 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 HLTFQ14527 1009 aaKnown RBP eCLIP11.86□□□□□ -0.51
CTC1-202ENST00000449476 OTUD7BQ6GQQ9 843 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 NAA15Q9BXJ9 866 aaKnown RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 ANGEL1Q9UNK9 670 aaKnown RBP11.86□□□□□ -0.51
CTC1-202ENST00000449476 SH3TC1Q8TE82 1336 aa11.86□□□□□ -0.51
CTC1-202ENST00000449476 UGGT1Q9NYU2 1555 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 TUBB4AP04350 444 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 ST5P78524 1137 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 TMEM87BQ96K49 555 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 F8W031 263 aaPredicted RBP11.85□□□□□ -0.51
CTC1-202ENST00000449476 CCDC175P0C221 793 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 MYL5Q02045 173 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 CDC37L1Q7L3B6 337 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 KRT222Q8N1A0 295 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 EAF2Q96CJ1 260 aaPredicted RBP11.85□□□□□ -0.51
CTC1-202ENST00000449476 FEZ1Q99689 392 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 EHMT1Q9H9B1 1298 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 NEURL1BA8MQ27 555 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 ELP1O95163 1332 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 ATP5JP18859 108 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.51
CTC1-202ENST00000449476 ANO1Q5XXA6 986 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 YEATS2Q9ULM3 1422 aa11.85□□□□□ -0.51
CTC1-202ENST00000449476 GOLGA6L7A0A1B0GV03 622 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 JAK2O60674 1132 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 BTG4Q9NY30 223 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 NSFL1CQ9UNZ2 370 aaKnown RBP11.84□□□□□ -0.51
CTC1-202ENST00000449476 KDM5DQ9BY66 1539 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 IQUBQ8NA54 791 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.511e-7■■■■■ 29.8
CTC1-202ENST00000449476 SPAG5Q96R06 1193 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 PLA2R1Q13018 1463 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 LIG1P18858 919 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 RILPL1Q5EBL4 403 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 C6orf50Q9HD87 102 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 AATKQ6ZMQ8 1374 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 CTAGE15A4D2H0 777 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 CTAGE8P0CG41 777 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 MCM7P33993 719 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 USP8P40818 1118 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 PKP1Q13835 747 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms