RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 SUSD4Q5VX71 490 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 NBPF5PQ86XG9 351 aaPredicted RBP9.56□□□□□ -0.88
LINC00954-202ENST00000449086 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 NUP62CLQ9H1M0 184 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 TRMT1Q9NXH9 659 aaKnown RBP9.56□□□□□ -0.88
LINC00954-202ENST00000449086 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
LINC00954-202ENST00000449086 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
LINC00954-202ENST00000449086 RPAP1Q9BWH6 1393 aaPredicted RBP9.55□□□□□ -0.88
LINC00954-202ENST00000449086 H7C1W4 665 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 GABPB1Q06547 395 aaPredicted RBP9.55□□□□□ -0.88
LINC00954-202ENST00000449086 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 KRT222Q8N1A0 295 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 PLA2G12BQ9BX93 195 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 TNMDQ9H2S6 317 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 ST7Q9NRC1 585 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 DDX60Q8IY21 1712 aaKnown RBP9.55□□□□□ -0.88
LINC00954-202ENST00000449086 KLRG2A4D1S0 409 aaPredicted RBP9.55□□□□□ -0.88
LINC00954-202ENST00000449086 GNAI2P04899 355 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 SLFN14P0C7P3 912 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 TYRO3Q06418 890 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 CEP135Q66GS9 1140 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 PRR5LQ6MZQ0 368 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 CWC27Q6UX04 472 aaKnown RBP9.55□□□□□ -0.88
LINC00954-202ENST00000449086 CLIP2Q9UDT6 1046 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 LIMCH1Q9UPQ0 1083 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 CD2APQ9Y5K6 639 aa9.55□□□□□ -0.88
LINC00954-202ENST00000449086 ATP5J2-PTCD1G3V325 749 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 GPTP24298 496 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 IRX5P78411 483 aaPredicted RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 TERF2Q15554 542 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 NECAB1Q8N987 351 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 KIF18AQ8NI77 898 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 TRMT112Q9UI30 125 aaKnown RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 ZNF215Q9UL58 517 aaPredicted RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 DLEC1Q9Y238 1755 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 GRM8O00222 908 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 LARGE1O95461 756 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 LIG1P18858 919 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 ZSCAN25Q6NSZ9 544 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 BICDL1Q6ZP65 573 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 FILIP1Q7Z7B0 1213 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 FBXW7Q969H0 707 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 FUCA2Q9BTY2 467 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 DACT1Q9NYF0 836 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
LINC00954-202ENST00000449086 GNAI3P08754 354 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 CASP7P55210 303 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 RUFY3Q7L099 469 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 TMEM87AQ8NBN3 555 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
LINC00954-202ENST00000449086 ANKRD31Q8N7Z5 1873 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 KIAA1551Q9HCM1 1747 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 PDE6BP35913 854 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 TGFB2P61812 414 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 ELF2Q15723 593 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 CACTINQ8WUQ7 758 aaKnown RBP9.53□□□□□ -0.88
LINC00954-202ENST00000449086 DNAJC25Q9H1X3 360 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 CBX8Q9HC52 389 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 PAXBP1Q9Y5B6 917 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 LRRFIP2Q9Y608 721 aaKnown RBP9.53□□□□□ -0.88
LINC00954-202ENST00000449086 RTL9Q8NET4 1388 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 NPM3O75607 178 aaKnown RBP9.53□□□□□ -0.88
LINC00954-202ENST00000449086 HSPA4P34932 840 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 ARID5BQ14865 1188 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 LARP1BQ659C4 914 aaKnown RBP9.53□□□□□ -0.88
LINC00954-202ENST00000449086 BICD2Q8TD16 824 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 C9orf78Q9NZ63 289 aaPredicted RBP9.53□□□□□ -0.88
LINC00954-202ENST00000449086 SNX14Q9Y5W7 946 aa9.53□□□□□ -0.88
LINC00954-202ENST00000449086 ZNF165P49910 485 aa9.52□□□□□ -0.88
LINC00954-202ENST00000449086 KRT85P78386 507 aa9.52□□□□□ -0.88
LINC00954-202ENST00000449086 PTPN14Q15678 1187 aa9.52□□□□□ -0.88
LINC00954-202ENST00000449086 JAKMIP1Q96N16 626 aaKnown RBP9.52□□□□□ -0.88
LINC00954-202ENST00000449086 USP44Q9H0E7 712 aa9.52□□□□□ -0.88
LINC00954-202ENST00000449086 MRVI1Q9Y6F6 885 aa9.52□□□□□ -0.88
LINC00954-202ENST00000449086 TNRC6CQ9HCJ0 1690 aaKnown RBP9.52□□□□□ -0.89
LINC00954-202ENST00000449086 USP27XA6NNY8 438 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 GOLGA6L19H0YKK7 550 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 PDE8AO60658 829 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 CRY2Q49AN0 593 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 TTC6Q86TZ1 520 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 GTF3C6Q969F1 213 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 SALL3Q9BXA9 1300 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 MYH3P11055 1940 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 ABCC12Q96J65 1359 aa9.52□□□□□ -0.89
LINC00954-202ENST00000449086 SF3B3Q15393 1217 aaKnown RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 ERFEQ4G0M1 354 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 MTMR6Q9Y217 621 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 SURF6O75683 361 aaKnown RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 CEBPZQ03701 1054 aaKnown RBP9.51□□□□□ -0.89
LINC00954-202ENST00000449086 CCDC144BQ3MJ40 725 aa9.51□□□□□ -0.89
LINC00954-202ENST00000449086 FBXO38Q6PIJ6 1188 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms