RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 IL16Q14005 1332 aa6.96□□□□□ -1.3
PCDH15-219ENST00000448885 GBP1P32455 592 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 SLC8A3P57103 927 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 ATP11AP98196 1134 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 KLHL40Q2TBA0 621 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 INTS8Q75QN2 995 aaKnown RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 KRT28Q7Z3Y7 464 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 STX8Q9UNK0 236 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 FRMD4BQ9Y2L6 1034 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 E7EVH7 732 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 WASLO00401 505 aaPredicted RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CASQ2O14958 399 aaPredicted RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CALUO43852 315 aaPredicted RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 EPB41P11171 864 aaKnown RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 Q6ZUG5 572 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CAPZA3Q96KX2 299 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 DNAI1Q9UI46 699 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 PPP1R2P41236 205 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 LIN9Q5TKA1 542 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 HS2ST1Q7LGA3 356 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CCDC26Q8TAB7 109 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CCDC42Q96M95 316 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 SH2D4AQ9H788 454 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 FAM204AQ9H8W3 233 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 FAM114A2Q9NRY5 505 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 NKIRAS1Q9NYS0 192 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 KRT5P13647 590 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 RPL13P26373 211 aaKnown RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CLUL1Q15846 466 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CCDC65Q8IXS2 484 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 GDPD2Q9HCC8 539 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 NEURL4Q96JN8 1562 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 SMIM23A6NLE4 172 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 KIF3CO14782 793 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 SATB1Q01826 763 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 RASA3Q14644 834 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 TTC31Q49AM3 519 aaPredicted RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 VWA3BQ502W6 1294 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 WAPLQ7Z5K2 1190 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CPLX4Q7Z7G2 160 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 UBLCP1Q8WVY7 318 aaPredicted RBP6.95□□□□□ -1.3
PCDH15-219ENST00000448885 CNPY2Q9Y2B0 182 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 DMRT2Q9Y5R5 561 aa6.95□□□□□ -1.3
PCDH15-219ENST00000448885 ATP5J2-PTCD1G3V325 749 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ZNF710Q8N1W2 664 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ARFGAP2Q8N6H7 521 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 BRF1Q92994 677 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 RNF34Q969K3 372 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 KIFC2Q96AC6 838 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 HAUS7Q99871 368 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 PTGS1P23219 599 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TNNI2P48788 182 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ARID5AQ03989 594 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 GIMAP6Q6P9H5 292 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 SRGAP1Q7Z6B7 1085 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 RBM17Q96I25 401 aaKnown RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ANKRD2Q9GZV1 360 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 RNF216Q9NWF9 866 aaPredicted RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 EMILIN1Q9Y6C2 1016 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TRIM75PA6NK02 468 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ATP6V1AP38606 617 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 FAM76AQ8TAV0 307 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 IFT81Q8WYA0 676 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 IFT74Q96LB3 600 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 EXOC7Q9UPT5 735 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 GNA11P29992 359 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ITIH3Q06033 890 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TRPC3Q13507 836 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 ATP2B3Q16720 1220 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 GEN1Q17RS7 908 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 INF2Q27J81 1249 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 KMT5BQ4FZB7 885 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 VPS18Q9P253 973 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 PARP3Q9Y6F1 533 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 F13A1P00488 732 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 LMOD1P29536 600 aaPredicted RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 UBE3BQ7Z3V4 1068 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 CACNA2D3Q8IZS8 1091 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TMX3Q96JJ7 454 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 EYA3Q99504 573 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 MBIPQ9NS73 344 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 RNF113AO15541 343 aaKnown RBP6.94□□□□□ -1.3
PCDH15-219ENST00000448885 POLD1P28340 1107 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 CUL4BQ13620 913 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TRIM14Q14142 442 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 TAOK1Q7L7X3 1001 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 USP48Q86UV5 1035 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
PCDH15-219ENST00000448885 STX10O60499 249 aa6.93□□□□□ -1.3
PCDH15-219ENST00000448885 TRIM27P14373 513 aa6.93□□□□□ -1.3
PCDH15-219ENST00000448885 ARID4AP29374 1257 aaPredicted RBP6.93□□□□□ -1.3
PCDH15-219ENST00000448885 PPP1R21Q6ZMI0 780 aa6.93□□□□□ -1.3
PCDH15-219ENST00000448885 CCDC25Q86WR0 208 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms