RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 KCNK17Q96T54 332 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 DBNDD2Q9BQY9 259 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 GREM2Q9H772 168 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
RFC4-209ENST00000448497 MROH5Q6ZUA9 1318 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 A0A1B0GUL7 405 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 ZMYND10O75800 440 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 SF3B3Q15393 1217 aaKnown RBP8.34□□□□□ -1.07
RFC4-209ENST00000448497 CCDC152Q4G0S7 254 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 SLC27A3Q5K4L6 730 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 LDHAL6AQ6ZMR3 332 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 PTF1AQ7RTS3 328 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 SYNE4Q8N205 404 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 KBTBD3Q8NAB2 608 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 ARXQ96QS3 562 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 PUS3Q9BZE2 481 aaKnown RBP8.34□□□□□ -1.07
RFC4-209ENST00000448497 IL25Q9H293 177 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 BOLA2Q9H3K6 86 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
RFC4-209ENST00000448497 NPDC1Q9NQX5 325 aaPredicted RBP8.34□□□□□ -1.07
RFC4-209ENST00000448497 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
RFC4-209ENST00000448497 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
RFC4-209ENST00000448497 CCDC171Q6TFL3 1326 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 PDE8BO95263 885 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 MAP4K4O95819 1239 aaPredicted RBP8.33□□□□□ -1.08
RFC4-209ENST00000448497 TIMM10P62072 90 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 LRRFIP1Q32MZ4 808 aaKnown RBP8.33□□□□□ -1.08
RFC4-209ENST00000448497 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 TAF7LQ5H9L4 462 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 ZNF772Q68DY9 489 aaPredicted RBP8.33□□□□□ -1.08
RFC4-209ENST00000448497 CWC27Q6UX04 472 aaKnown RBP8.33□□□□□ -1.08
RFC4-209ENST00000448497 KRT27Q7Z3Y8 459 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 MAP4K1Q92918 833 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 FSD1Q9BTV5 496 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 TM6SF1Q9BZW5 370 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 NYXQ9GZU5 481 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 CHMP5Q9NZZ3 219 aa8.33□□□□□ -1.08
RFC4-209ENST00000448497 RTCBQ9Y3I0 505 aaKnown RBP8.33□□□□□ -1.08
RFC4-209ENST00000448497 MYO5AQ9Y4I1 1855 aaKnown RBP8.32□□□□□ -1.08
RFC4-209ENST00000448497 CD2BP2O95400 341 aaKnown RBP8.32□□□□□ -1.08
RFC4-209ENST00000448497 FGFR2P21802 821 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 PRSS12P56730 875 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 RBM6P78332 1123 aaKnown RBP8.32□□□□□ -1.08
RFC4-209ENST00000448497 NMIQ13287 307 aaPredicted RBP8.32□□□□□ -1.08
RFC4-209ENST00000448497 NECTIN1Q15223 517 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 ATP2B3Q16720 1220 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 CCDC158Q5M9N0 1113 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 XAGE2Q96GT9 111 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 SLC4A5Q9BY07 1137 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 HELLSQ9NRZ9 838 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 PAG1Q9NWQ8 432 aa8.32□□□□□ -1.08
RFC4-209ENST00000448497 A0A0D9SFI3 127 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 ZPR1O75312 459 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 ZFYP08048 801 aaPredicted RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 IFIT1P09914 478 aaKnown RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 UQCRFS1P1P0C7P4 283 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 COL9A1P20849 921 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 SSFA2P28290 1259 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 ARID4AP29374 1257 aaPredicted RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 PUM3Q15397 648 aaKnown RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 LPIN2Q92539 896 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 CDC5LQ99459 802 aaKnown RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 CWC22Q9HCG8 908 aaKnown RBP8.31□□□□□ -1.08
RFC4-209ENST00000448497 CNNM1Q9NRU3 951 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 HMG20BQ9P0W2 317 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 SNX14Q9Y5W7 946 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 LAMA4Q16363 1823 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 MYH13Q9UKX3 1938 aa8.31□□□□□ -1.08
RFC4-209ENST00000448497 TAF1P21675 1872 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 POTEMA6NI47 508 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 TAF5LO75529 589 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 PTH1RQ03431 593 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 CUL4AQ13619 759 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 MCMDC2Q4G0Z9 681 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 RNF20Q5VTR2 975 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 TBC1D9BQ66K14 1250 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 POTEEQ6S8J3 1075 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 CLEC17AQ6ZS10 378 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 INTS4Q96HW7 963 aaKnown RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 FAM227BQ96M60 508 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 TTC14Q96N46 770 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
RFC4-209ENST00000448497 RPAP1Q9BWH6 1393 aaPredicted RBP8.3□□□□□ -1.08
RFC4-209ENST00000448497 QSER1Q2KHR3 1735 aa8.29□□□□□ -1.08
RFC4-209ENST00000448497 NRXN2Q9P2S2 1712 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms