RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 LRP2BPQ9P2M1 347 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
ERCC6-203ENST00000447839 E7EWF7 191 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 HMGB1P09429 215 aaKnown RBP13.9□□□□□ -0.18
ERCC6-203ENST00000447839 CAVIN4Q5BKX8 364 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 AIDAQ96BJ3 306 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
ERCC6-203ENST00000447839 LRP5O75197 1615 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
ERCC6-203ENST00000447839 CHST3Q7LGC8 479 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 BRF1Q92994 677 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 GNL3LQ9NVN8 582 aaKnown RBP13.9□□□□□ -0.18
ERCC6-203ENST00000447839 ABCF2Q9UG63 623 aa13.9□□□□□ -0.18
ERCC6-203ENST00000447839 PRPF40AO75400 957 aaKnown RBP13.89□□□□□ -0.19
ERCC6-203ENST00000447839 UBE3CQ15386 1083 aa13.89□□□□□ -0.19
ERCC6-203ENST00000447839 DHX32Q7L7V1 743 aaKnown RBP13.89□□□□□ -0.19
ERCC6-203ENST00000447839 SBF2Q86WG5 1849 aa13.89□□□□□ -0.19
ERCC6-203ENST00000447839 ZNF213O14771 459 aa13.89□□□□□ -0.19
ERCC6-203ENST00000447839 UBE4AQ14139 1066 aa13.89□□□□□ -0.19
ERCC6-203ENST00000447839 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 SYT1P21579 422 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 SLC27A3Q5K4L6 730 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 C4BP0C0L5 1744 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 CARMIL3Q8ND23 1372 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 STX6O43752 255 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 ADRA2BP18089 450 aa13.88□□□□□ -0.19
ERCC6-203ENST00000447839 TAF1P21675 1872 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 VPS37CA5D8V6 355 aaPredicted RBP13.87□□□□□ -0.19
ERCC6-203ENST00000447839 ST3GAL1Q11201 340 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 ALDH8A1Q9H2A2 487 aaPredicted RBP13.87□□□□□ -0.19
ERCC6-203ENST00000447839 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 COL4A1P02462 1669 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 FOXP2O15409 715 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
ERCC6-203ENST00000447839 LY75O60449 1722 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 TXNRD1Q16881 649 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 ZNF772Q68DY9 489 aaPredicted RBP13.87□□□□□ -0.19
ERCC6-203ENST00000447839 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
ERCC6-203ENST00000447839 LAMB2P55268 1798 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 MBD4O95243 580 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 RALYLQ86SE5 291 aaKnown RBP13.86□□□□□ -0.19
ERCC6-203ENST00000447839 APOBRQ0VD83 1088 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 LARP1BQ659C4 914 aaKnown RBP13.86□□□□□ -0.19
ERCC6-203ENST00000447839 ARMT1Q9H993 441 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 TFCP2L1Q9NZI6 479 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 TAF1LQ8IZX4 1826 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
ERCC6-203ENST00000447839 GYS1P13807 737 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 MIGA1Q8NAN2 632 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 ANKIB1Q9P2G1 1089 aa13.86□□□□□ -0.19
ERCC6-203ENST00000447839 LMBRD1Q9NUN5 540 aa13.85□□□□□ -0.19
ERCC6-203ENST00000447839 TRDNQ13061 729 aa13.85□□□□□ -0.19
ERCC6-203ENST00000447839 TPRNQ4KMQ1 711 aa13.85□□□□□ -0.19
ERCC6-203ENST00000447839 RPGRQ92834 1020 aaKnown RBP13.85□□□□□ -0.19
ERCC6-203ENST00000447839 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
ERCC6-203ENST00000447839 APBA3O96018 575 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 KLRK1P26718 216 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 PRR5LQ6MZQ0 368 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
ERCC6-203ENST00000447839 GDPD2Q9HCC8 539 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 SERPINB2P05120 415 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 CYP7A1P22680 504 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 ST5P78524 1137 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 TM4SF1P30408 202 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 CCT2P78371 535 aaKnown RBP13.84□□□□□ -0.19
ERCC6-203ENST00000447839 EXOSC10Q01780 885 aaKnown RBP13.84□□□□□ -0.19
ERCC6-203ENST00000447839 GTF3C6Q969F1 213 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 NAPBQ9H115 298 aa13.84□□□□□ -0.19
ERCC6-203ENST00000447839 CHAF1AQ13111 956 aaPredicted RBP13.83□□□□□ -0.19
ERCC6-203ENST00000447839 DDX11Q96FC9 970 aa13.83□□□□□ -0.19
ERCC6-203ENST00000447839 DENND2AQ9ULE3 1009 aa13.83□□□□□ -0.19
ERCC6-203ENST00000447839 MYO5AQ9Y4I1 1855 aaKnown RBP13.83□□□□□ -0.2
ERCC6-203ENST00000447839 HIBADHP31937 336 aaKnown RBP13.83□□□□□ -0.2
ERCC6-203ENST00000447839 KLHL40Q2TBA0 621 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 PROM2Q8N271 834 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 MYH7P12883 1935 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 ZNF804BA4D1E1 1349 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 PRC1O43663 620 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 JAK2O60674 1132 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 F13A1P00488 732 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 MCM5P33992 734 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 ATP6V1DQ9Y5K8 247 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
ERCC6-203ENST00000447839 GOLGA6L3A6NEY3 463 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
ERCC6-203ENST00000447839 PDCP20941 246 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 TDO2P48775 406 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 GRAPQ13588 217 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
ERCC6-203ENST00000447839 FAM184AQ8NB25 1140 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
ERCC6-203ENST00000447839 GPHNQ9NQX3 736 aaPredicted RBP13.82□□□□□ -0.2
ERCC6-203ENST00000447839 JAG2Q9Y219 1238 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 BRWD3Q6RI45 1802 aa13.82□□□□□ -0.2
ERCC6-203ENST00000447839 PRKAB2O43741 272 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms