RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SPEM2Q0P670 501 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 LBRQ14739 615 aaKnown RBP9.08□□□□□ -0.96
COL11A1-205ENST00000447608 BNC2Q6ZN30 1099 aaPredicted RBP9.08□□□□□ -0.96
COL11A1-205ENST00000447608 RIPOR1Q6ZS17 1223 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 ASAP3Q8TDY4 903 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 BHMTQ93088 406 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 SLC30A3Q99726 388 aa9.08□□□□□ -0.96
COL11A1-205ENST00000447608 HOXD8P13378 290 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 RPS26P62854 115 aaKnown RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 LAMC2Q13753 1193 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 UBAP2LQ14157 1087 aaKnown RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 RAB44Q7Z6P3 723 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 TRIM42Q8IWZ5 723 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 FAM169BQ8N8A8 192 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 TMEM102Q8N9M5 508 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 KCNB2Q92953 911 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 ZFP42Q96MM3 310 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 GPN3Q9UHW5 284 aaPredicted RBP9.07□□□□□ -0.96
COL11A1-205ENST00000447608 PCDHB5Q9Y5E4 795 aa9.07□□□□□ -0.96
COL11A1-205ENST00000447608 hCG_2014768A0A024R1R8 64 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
COL11A1-205ENST00000447608 IGBP1P78318 339 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 RNF187Q5TA31 235 aaPredicted RBP9.06□□□□□ -0.96
COL11A1-205ENST00000447608 LRP10Q7Z4F1 713 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 CELF2-AS1Q8N7Q2 184 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
COL11A1-205ENST00000447608 ZNF576Q9H609 170 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 PLA2G2EQ9NZK7 142 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 MARK1Q9P0L2 795 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 ROBO2Q9HCK4 1378 aa9.06□□□□□ -0.96
COL11A1-205ENST00000447608 PDE2AO00408 941 aaPredicted RBP9.05□□□□□ -0.96
COL11A1-205ENST00000447608 BNIP3LO60238 219 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 MCM4P33991 863 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 EIF6P56537 245 aaKnown RBP9.05□□□□□ -0.96
COL11A1-205ENST00000447608 CHMP4BP1P59074 171 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.05□□□□□ -0.96
COL11A1-205ENST00000447608 TNNI3KQ59H18 835 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 RPS26P11Q5JNZ5 115 aaPredicted RBP9.05□□□□□ -0.96
COL11A1-205ENST00000447608 RASIP1Q5U651 963 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 PLD4Q96BZ4 506 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 NUCKS1Q9H1E3 243 aaKnown RBP9.05□□□□□ -0.96
COL11A1-205ENST00000447608 KANSL2Q9H9L4 492 aa9.05□□□□□ -0.96
COL11A1-205ENST00000447608 J3QW42 95 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 RAB11FIP3O75154 756 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 LMNB1P20700 586 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 IBSPP21815 317 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-205ENST00000447608 NRLP54845 237 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 MLLT1Q03111 559 aaPredicted RBP9.04□□□□□ -0.96
COL11A1-205ENST00000447608 FBXW10Q5XX13 1052 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 FILIP1Q7Z7B0 1213 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 GATAD2BQ8WXI9 593 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 LRRC3Q9BY71 257 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 EFCC1Q9HA90 598 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 CWC22Q9HCG8 908 aaKnown RBP9.04□□□□□ -0.96
COL11A1-205ENST00000447608 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 TMEM39AQ9NV64 488 aa9.04□□□□□ -0.96
COL11A1-205ENST00000447608 LOC102724428A0A0B4J2F2 783 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 FAM221AA4D161 298 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 CD33P20138 364 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 GIPRP48546 466 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 SIK1P57059 783 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 ATP11AP98196 1134 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 KANK3Q6NY19 840 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 CCDC84Q86UT8 332 aaPredicted RBP9.03□□□□□ -0.96
COL11A1-205ENST00000447608 LILRB2Q8N423 598 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 SH3TC2Q8TF17 1288 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 FERD3LQ96RJ6 166 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 CRBNQ96SW2 442 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 DNAJC7Q99615 494 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 PBX4Q9BYU1 374 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 CCDC113Q9H0I3 377 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 MUC3BQ9H195 1237 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 MIR1-1HGQ9H1L0 117 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 NDFIP2Q9NV92 336 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 IFT57Q9NWB7 429 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 MSRB2Q9Y3D2 182 aa9.03□□□□□ -0.96
COL11A1-205ENST00000447608 ZBTB42B2RXF5 422 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 BMP6P22004 513 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 SEPT6Q14141 434 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 CWF19L2Q2TBE0 894 aaKnown RBP9.02□□□□□ -0.97
COL11A1-205ENST00000447608 PLEKHG4Q58EX7 1191 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 ABHD17AQ96GS6 310 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 BRMS1Q9HCU9 246 aa9.02□□□□□ -0.97
COL11A1-205ENST00000447608 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 AVPP01185 164 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 ZNF165P49910 485 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 MPP2Q14168 576 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 DBN1Q16643 649 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 DDR2Q16832 855 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 ZCRB1Q8TBF4 217 aaKnown RBP9.01□□□□□ -0.97
COL11A1-205ENST00000447608 FANCLQ9NW38 375 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 ACTR10Q9NZ32 417 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 NOP58Q9Y2X3 529 aaKnown RBP9.01□□□□□ -0.97
COL11A1-205ENST00000447608 COL4A3BPQ9Y5P4 624 aa9.01□□□□□ -0.97
COL11A1-205ENST00000447608 MAN1A2O60476 641 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms