RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 CNTROBQ8N137 903 aa25.42■■□□□ 1.66
PTX4-203ENST00000447419 TDRD7Q8NHU6 1098 aaKnown RBP25.42■■□□□ 1.66
PTX4-203ENST00000447419 KIF4BQ2VIQ3 1234 aa25.42■■□□□ 1.66
PTX4-203ENST00000447419 SASH1O94885 1247 aa25.41■■□□□ 1.66
PTX4-203ENST00000447419 DLK2Q6UY11 383 aa25.41■■□□□ 1.66
PTX4-203ENST00000447419 BCL11AQ9H165 835 aa25.41■■□□□ 1.66
PTX4-203ENST00000447419 TRAF5O00463 557 aa25.4■■□□□ 1.66
PTX4-203ENST00000447419 NEUROD6Q96NK8 337 aa25.4■■□□□ 1.66
PTX4-203ENST00000447419 MYOZ2Q9NPC6 264 aa25.4■■□□□ 1.66
PTX4-203ENST00000447419 SCAF8Q9UPN6 1271 aaKnown RBP25.4■■□□□ 1.66
PTX4-203ENST00000447419 ADAMTSL1Q8N6G6 1762 aa25.4■■□□□ 1.66
PTX4-203ENST00000447419 A0A1B0GUL7 405 aa25.39■■□□□ 1.66
PTX4-203ENST00000447419 ZNF280AP59817 542 aaPredicted RBP25.39■■□□□ 1.66
PTX4-203ENST00000447419 SIRT2Q8IXJ6 389 aa25.39■■□□□ 1.66
PTX4-203ENST00000447419 EXOC6BQ9Y2D4 811 aa25.39■■□□□ 1.66
PTX4-203ENST00000447419 ITGBL1O95965 494 aaPredicted RBP25.38■■□□□ 1.65
PTX4-203ENST00000447419 PHKA1P46020 1223 aa25.38■■□□□ 1.65
PTX4-203ENST00000447419 GRIK5Q16478 980 aa25.38■■□□□ 1.65
PTX4-203ENST00000447419 GLIS2Q9BZE0 524 aaPredicted RBP25.38■■□□□ 1.65
PTX4-203ENST00000447419 PCDHAC2Q9Y5I4 1007 aa25.38■■□□□ 1.65
PTX4-203ENST00000447419 CEP350Q5VT06 3117 aa25.38■■□□□ 1.65
PTX4-203ENST00000447419 APBB1O00213 710 aa25.37■■□□□ 1.65
PTX4-203ENST00000447419 MFSD14BQ5SR56 506 aa25.37■■□□□ 1.65
PTX4-203ENST00000447419 OGFOD1Q8N543 542 aa25.37■■□□□ 1.65
PTX4-203ENST00000447419 ZNF646O15015 1829 aaPredicted RBP25.37■■□□□ 1.65
PTX4-203ENST00000447419 MYO3BQ8WXR4 1341 aa25.37■■□□□ 1.65
PTX4-203ENST00000447419 SCARF1Q14162 830 aa25.36■■□□□ 1.65
PTX4-203ENST00000447419 NBPF9Q3BBW0 867 aa25.36■■□□□ 1.65
PTX4-203ENST00000447419 XAGE2Q96GT9 111 aa25.36■■□□□ 1.65
PTX4-203ENST00000447419 GGA3Q9NZ52 723 aa25.36■■□□□ 1.65
PTX4-203ENST00000447419 PSME4Q14997 1843 aa25.36■■□□□ 1.65
PTX4-203ENST00000447419 FAM205AQ6ZU69 1335 aa25.35■■□□□ 1.65
PTX4-203ENST00000447419 CRBNQ96SW2 442 aa25.35■■□□□ 1.65
PTX4-203ENST00000447419 AKAP2Q9Y2D5 859 aa25.35■■□□□ 1.65
PTX4-203ENST00000447419 ZNF609O15014 1411 aa25.34■■□□□ 1.65
PTX4-203ENST00000447419 APLP1P51693 650 aa25.34■■□□□ 1.65
PTX4-203ENST00000447419 CCDC102BQ68D86 513 aa25.34■■□□□ 1.65
PTX4-203ENST00000447419 USP48Q86UV5 1035 aa25.34■■□□□ 1.65
PTX4-203ENST00000447419 COL1A1P02452 1464 aaPredicted RBP25.34■■□□□ 1.65
PTX4-203ENST00000447419 PASKQ96RG2 1323 aa25.33■■□□□ 1.65
PTX4-203ENST00000447419 ANGEL2Q5VTE6 544 aaKnown RBP25.33■■□□□ 1.65
PTX4-203ENST00000447419 HDAC9Q9UKV0 1011 aa25.33■■□□□ 1.65
PTX4-203ENST00000447419 NOP58Q9Y2X3 529 aaKnown RBP25.33■■□□□ 1.65
PTX4-203ENST00000447419 ADM5C9JUS6 153 aa25.32■■□□□ 1.64
PTX4-203ENST00000447419 RPAP2Q8IXW5 612 aaPredicted RBP25.32■■□□□ 1.64
PTX4-203ENST00000447419 CHMP4BQ9H444 224 aaKnown RBP25.32■■□□□ 1.64
PTX4-203ENST00000447419 GORABQ5T7V8 394 aa25.32■■□□□ 1.64
PTX4-203ENST00000447419 ZNF408Q9H9D4 720 aa25.32■■□□□ 1.64
PTX4-203ENST00000447419 PGAP2Q9UHJ9 254 aa25.32■■□□□ 1.64
PTX4-203ENST00000447419 TTF2Q9UNY4 1162 aaKnown RBP25.32■■□□□ 1.64
PTX4-203ENST00000447419 WNT10BO00744 389 aa25.31■■□□□ 1.64
PTX4-203ENST00000447419 RBM5P52756 815 aaKnown RBP eCLIP25.31■■□□□ 1.64
PTX4-203ENST00000447419 TNNI3KQ59H18 835 aa25.31■■□□□ 1.64
PTX4-203ENST00000447419 KRT26Q7Z3Y9 468 aa25.31■■□□□ 1.64
PTX4-203ENST00000447419 ZC3H15Q8WU90 426 aaKnown RBP25.31■■□□□ 1.64
PTX4-203ENST00000447419 DCPSQ96C86 337 aaKnown RBP25.31■■□□□ 1.64
PTX4-203ENST00000447419 SUPT16HQ9Y5B9 1047 aaKnown RBP25.31■■□□□ 1.64
PTX4-203ENST00000447419 FPGT-TNNI3KV9GXZ4 949 aa25.31■■□□□ 1.64
PTX4-203ENST00000447419 AOX1Q06278 1338 aa25.3■■□□□ 1.64
PTX4-203ENST00000447419 IL1RAPL2Q9NP60 686 aa25.3■■□□□ 1.64
PTX4-203ENST00000447419 GNL3LQ9NVN8 582 aaKnown RBP25.3■■□□□ 1.64
PTX4-203ENST00000447419 TLR7Q9NYK1 1049 aaKnown RBP25.3■■□□□ 1.64
PTX4-203ENST00000447419 CFAP100Q494V2 611 aa25.29■■□□□ 1.64
PTX4-203ENST00000447419 PI16Q6UXB8 463 aa25.29■■□□□ 1.64
PTX4-203ENST00000447419 DBNDD2Q9BQY9 259 aa25.29■■□□□ 1.64
PTX4-203ENST00000447419 CCDC8Q9H0W5 538 aaPredicted RBP25.29■■□□□ 1.64
PTX4-203ENST00000447419 HMMRO75330 724 aa25.28■■□□□ 1.64
PTX4-203ENST00000447419 FKBP1AP62942 108 aaKnown RBP25.28■■□□□ 1.64
PTX4-203ENST00000447419 RASGRF1Q13972 1273 aa25.28■■□□□ 1.64
PTX4-203ENST00000447419 DLGAP5Q15398 846 aa25.28■■□□□ 1.64
PTX4-203ENST00000447419 CDC37L1Q7L3B6 337 aa25.28■■□□□ 1.64
PTX4-203ENST00000447419 CLRN2A0PK11 232 aa25.27■■□□□ 1.64
PTX4-203ENST00000447419 PRAMEF18Q5VWM3 479 aa25.27■■□□□ 1.64
PTX4-203ENST00000447419 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
PTX4-203ENST00000447419 SULF1Q8IWU6 871 aa25.26■■□□□ 1.63
PTX4-203ENST00000447419 TBC1D22AQ8WUA7 517 aa25.26■■□□□ 1.63
PTX4-203ENST00000447419 PRMT6Q96LA8 375 aaPredicted RBP25.26■■□□□ 1.63
PTX4-203ENST00000447419 PCDHB15Q9Y5E8 787 aa25.26■■□□□ 1.63
PTX4-203ENST00000447419 CELF2O95319 508 aaKnown RBP25.25■■□□□ 1.63
PTX4-203ENST00000447419 PRDX5P30044 214 aa25.25■■□□□ 1.63
PTX4-203ENST00000447419 CST9Q5W186 159 aa25.25■■□□□ 1.63
PTX4-203ENST00000447419 DENND2AQ9ULE3 1009 aa25.25■■□□□ 1.63
PTX4-203ENST00000447419 TMEM88BA6NKF7 163 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 IRX6P78412 446 aaPredicted RBP25.24■■□□□ 1.63
PTX4-203ENST00000447419 AACSQ86V21 672 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 WDR66Q8TBY9 1149 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 RHPN1Q8TCX5 695 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 SNRKQ9NRH2 765 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 DBNLQ9UJU6 430 aaKnown RBP25.24■■□□□ 1.63
PTX4-203ENST00000447419 ARAP2Q8WZ64 1704 aa25.24■■□□□ 1.63
PTX4-203ENST00000447419 SPDYE2BA6NHP3 402 aa25.23■■□□□ 1.63
PTX4-203ENST00000447419 SPDYE6P0CI01 402 aa25.23■■□□□ 1.63
PTX4-203ENST00000447419 CRKP46108 304 aa25.23■■□□□ 1.63
PTX4-203ENST00000447419 ZBED3Q96IU2 234 aaPredicted RBP25.23■■□□□ 1.63
PTX4-203ENST00000447419 GPR108Q9NPR9 543 aa25.23■■□□□ 1.63
PTX4-203ENST00000447419 MKRN1Q9UHC7 482 aaKnown RBP25.23■■□□□ 1.63
PTX4-203ENST00000447419 TTC39AQ5SRH9 613 aa25.22■■□□□ 1.63
PTX4-203ENST00000447419 ERC1Q8IUD2 1116 aa25.22■■□□□ 1.63
PTX4-203ENST00000447419 VEZTQ9HBM0 779 aa25.22■■□□□ 1.63
PTX4-203ENST00000447419 CREBZFQ9NS37 354 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms