RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 FBXW7Q969H0 707 aa9.45□□□□□ -0.9
HDAC9-216ENST00000446646 CFHR5Q9BXR6 569 aa9.45□□□□□ -0.9
HDAC9-216ENST00000446646 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-216ENST00000446646 IBTKQ9P2D0 1353 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-216ENST00000446646 RBBP6Q7Z6E9 1792 aaKnown RBP9.45□□□□□ -0.9
HDAC9-216ENST00000446646 TAF1P21675 1872 aa9.45□□□□□ -0.9
HDAC9-216ENST00000446646 SCN9AQ15858 1988 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 ERVV-1B6SEH8 477 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 IGF2BP3O00425 579 aaKnown RBP eCLIP9.44□□□□□ -0.9
HDAC9-216ENST00000446646 ECE2O60344 883 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 PDIA6Q15084 440 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 ZNF333Q96JL9 665 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
HDAC9-216ENST00000446646 NUP98P52948 1817 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 ZNF609O15014 1411 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 DIAPH1O60610 1272 aaKnown RBP9.43□□□□□ -0.9
HDAC9-216ENST00000446646 BBOX1O75936 387 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 MYL6BP14649 208 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 RPS12P25398 132 aaKnown RBP9.43□□□□□ -0.9
HDAC9-216ENST00000446646 ZNF280AP59817 542 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-216ENST00000446646 FKBP1BP68106 108 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 GPSM2P81274 684 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 PRKG1Q13976 671 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 SLC10A5Q5PT55 438 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 GAS2L2Q8NHY3 880 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 EPAS1Q99814 870 aa9.43□□□□□ -0.9
HDAC9-216ENST00000446646 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
HDAC9-216ENST00000446646 COL3A1P02461 1466 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-216ENST00000446646 PITPNM2Q9BZ72 1349 aa9.42□□□□□ -0.9
HDAC9-216ENST00000446646 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-216ENST00000446646 VIL1P09327 827 aaKnown RBP9.42□□□□□ -0.9
HDAC9-216ENST00000446646 WASHC4Q2M389 1173 aa9.42□□□□□ -0.9
HDAC9-216ENST00000446646 ZBED2Q9BTP6 218 aa9.42□□□□□ -0.9
HDAC9-216ENST00000446646 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-216ENST00000446646 PPP1R3GB7ZBB8 358 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 CRHR2Q13324 411 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 GRAPQ13588 217 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 TTLL12Q14166 644 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 NBPF9Q3BBW0 867 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 SPRYD7Q5W111 196 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 Q7L0L9 218 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 GRAPLQ8TC17 118 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 CELF1Q92879 486 aaKnown RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 SHISA4Q96DD7 197 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 MXD3Q9BW11 206 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 SLC4A5Q9BY07 1137 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
HDAC9-216ENST00000446646 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
HDAC9-216ENST00000446646 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 SEMA3EO15041 775 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 SREBF2Q12772 1141 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 PROSER3Q2NL68 480 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 KIF6Q6ZMV9 814 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 LRP10Q7Z4F1 713 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 SH3TC2Q8TF17 1288 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 CLMNQ96JQ2 1002 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 GMLQ99445 158 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
HDAC9-216ENST00000446646 EFCC1Q9HA90 598 aa9.4□□□□□ -0.9
HDAC9-216ENST00000446646 LAMB2P55268 1798 aa9.4□□□□□ -0.91
HDAC9-216ENST00000446646 KDM3BQ7LBC6 1761 aa9.4□□□□□ -0.91
HDAC9-216ENST00000446646 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-216ENST00000446646 ANXA1P04083 346 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 PRKAR2BP31323 418 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 GJA5P36382 358 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 SLC4A8Q2Y0W8 1093 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 GIGYF2Q6Y7W6 1299 aaKnown RBP9.39□□□□□ -0.91
HDAC9-216ENST00000446646 DDX46Q7L014 1031 aaKnown RBP9.39□□□□□ -0.91
HDAC9-216ENST00000446646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC9-216ENST00000446646 DPF3Q92784 378 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 KCTD12Q96CX2 325 aaKnown RBP9.39□□□□□ -0.91
HDAC9-216ENST00000446646 PTPN18Q99952 460 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 MYOZ2Q9NPC6 264 aa9.39□□□□□ -0.91
HDAC9-216ENST00000446646 COL9A1P20849 921 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 C6orf132Q5T0Z8 1188 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 RSBN1LQ6PCB5 846 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-216ENST00000446646 PPP1R42Q7Z4L9 355 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 RSPH6AQ9H0K4 717 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 LRRC37AA6NMS7 1700 aa9.38□□□□□ -0.91
HDAC9-216ENST00000446646 SASH1O94885 1247 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 MTFR1Q15390 333 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 PROX2Q3B8N5 592 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 NLRP10Q86W26 655 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 ERO1AQ96HE7 468 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 ARHGAP39Q9C0H5 1083 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 RAPGEFL1Q9UHV5 662 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 KNSTRNQ9Y448 316 aa9.37□□□□□ -0.91
HDAC9-216ENST00000446646 ARIH1Q9Y4X5 557 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-216ENST00000446646 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-216ENST00000446646 GRXCR2A6NFK2 248 aa9.36□□□□□ -0.91
HDAC9-216ENST00000446646 MAP3K7O43318 606 aa9.36□□□□□ -0.91
HDAC9-216ENST00000446646 USP17L8P0C7I0 530 aa9.36□□□□□ -0.91
HDAC9-216ENST00000446646 CNGB1Q14028 1251 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-216ENST00000446646 SLC9C1Q4G0N8 1177 aa9.36□□□□□ -0.91
HDAC9-216ENST00000446646 PARP10Q53GL7 1025 aa9.36□□□□□ -0.91
HDAC9-216ENST00000446646 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms