RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 GTF3C6Q969F1 213 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 FHOD1Q9Y613 1164 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 TOGARAM1Q9Y4F4 1720 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 NR1I2O75469 434 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 LRRC24Q50LG9 513 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 L2HGDHQ9H9P8 463 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 SPEF2Q9C093 1822 aa22.06■■□□□ 1.12
PMPCB-204ENST00000444457 HNRNPH2P55795 449 aaKnown RBP22.05■■□□□ 1.12
PMPCB-204ENST00000444457 Q6ZUG5 572 aa22.05■■□□□ 1.12
PMPCB-204ENST00000444457 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.05■■□□□ 1.12
PMPCB-204ENST00000444457 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
PMPCB-204ENST00000444457 HELLSQ9NRZ9 838 aa22.05■■□□□ 1.12
PMPCB-204ENST00000444457 CCDC69A6NI79 296 aa22.04■■□□□ 1.12
PMPCB-204ENST00000444457 GOLGA6L19H0YKK7 550 aa22.04■■□□□ 1.12
PMPCB-204ENST00000444457 ATG3Q9NT62 314 aa22.04■■□□□ 1.12
PMPCB-204ENST00000444457 CIAO1O76071 339 aa22.04■■□□□ 1.12
PMPCB-204ENST00000444457 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
PMPCB-204ENST00000444457 STOX1Q6ZVD7 989 aa22.03■■□□□ 1.12
PMPCB-204ENST00000444457 JAK2O60674 1132 aa22.03■■□□□ 1.12
PMPCB-204ENST00000444457 ZMYM1Q5SVZ6 1142 aa22.03■■□□□ 1.12
PMPCB-204ENST00000444457 DSCC1Q9BVC3 393 aa22.03■■□□□ 1.12
PMPCB-204ENST00000444457 A0A1B0GUL7 405 aa22.02■■□□□ 1.12
PMPCB-204ENST00000444457 HSP90B1P14625 803 aaKnown RBP22.02■■□□□ 1.12
PMPCB-204ENST00000444457 PGBD1Q96JS3 809 aa22.02■■□□□ 1.12
PMPCB-204ENST00000444457 ISCA1Q9BUE6 129 aa22.02■■□□□ 1.12
PMPCB-204ENST00000444457 STRN4Q9NRL3 753 aa22.02■■□□□ 1.12
PMPCB-204ENST00000444457 TRMT1Q9NXH9 659 aaKnown RBP22.02■■□□□ 1.12
PMPCB-204ENST00000444457 IFIT1P09914 478 aaKnown RBP22.02■■□□□ 1.11
PMPCB-204ENST00000444457 PLCD3Q8N3E9 789 aa22.02■■□□□ 1.11
PMPCB-204ENST00000444457 FEZ2Q9UHY8 353 aaPredicted RBP22.02■■□□□ 1.11
PMPCB-204ENST00000444457 PNMA6AP0CW24 399 aaPredicted RBP22.01■■□□□ 1.11
PMPCB-204ENST00000444457 CLCN6P51797 869 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 ERCC6LQ2NKX8 1250 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 BICD2Q8TD16 824 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 BRF1Q92994 677 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 PUS3Q9BZE2 481 aaKnown RBP22.01■■□□□ 1.11
PMPCB-204ENST00000444457 TFIP11Q9UBB9 837 aaKnown RBP22.01■■□□□ 1.11
PMPCB-204ENST00000444457 HMGB1P09429 215 aaKnown RBP22.01■■□□□ 1.11
PMPCB-204ENST00000444457 CCDC93Q567U6 631 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 LRRC2Q9BYS8 371 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 SLAIN2Q9P270 581 aa22.01■■□□□ 1.11
PMPCB-204ENST00000444457 PLA2G4AP47712 749 aa22■■□□□ 1.11
PMPCB-204ENST00000444457 RAD51AP2Q09MP3 1159 aa22■■□□□ 1.11
PMPCB-204ENST00000444457 C11orf57Q6ZUT1 292 aaPredicted RBP22■■□□□ 1.11
PMPCB-204ENST00000444457 TCIRG1Q13488 830 aa21.99■■□□□ 1.11
PMPCB-204ENST00000444457 TRIM34Q9BYJ4 488 aa21.99■■□□□ 1.11
PMPCB-204ENST00000444457 DHX32Q7L7V1 743 aaKnown RBP21.99■■□□□ 1.11
PMPCB-204ENST00000444457 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.99■■□□□ 1.11
PMPCB-204ENST00000444457 TMOD3Q9NYL9 352 aa21.99■■□□□ 1.11
PMPCB-204ENST00000444457 MAST3O60307 1309 aa21.99■■□□□ 1.11
PMPCB-204ENST00000444457 SCRN1Q12765 414 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 CEP126Q9P2H0 1117 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 RNF113AO15541 343 aaKnown RBP21.98■■□□□ 1.11
PMPCB-204ENST00000444457 ZRANB2O95218 330 aaKnown RBP eCLIP21.98■■□□□ 1.11
PMPCB-204ENST00000444457 HSPD1P10809 573 aaKnown RBP21.98■■□□□ 1.11
PMPCB-204ENST00000444457 GSDMDP57764 484 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 SNW1Q13573 536 aaKnown RBP21.98■■□□□ 1.11
PMPCB-204ENST00000444457 STX1AQ16623 288 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 CCDC57Q2TAC2 916 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 FILIP1Q7Z7B0 1213 aa21.98■■□□□ 1.11
PMPCB-204ENST00000444457 MYH15Q9Y2K3 1946 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 NPHP1O15259 732 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 EVA1CP58658 441 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 MUM1L1Q5H9M0 696 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 ZNF330Q9Y3S2 320 aaPredicted RBP21.97■■□□□ 1.11
PMPCB-204ENST00000444457 PFKFB2O60825 505 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 RESTQ13127 1097 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 SMARCC2Q8TAQ2 1214 aa21.97■■□□□ 1.11
PMPCB-204ENST00000444457 LLPHQ9BRT6 129 aaKnown RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 EXOSC10Q01780 885 aaKnown RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 TRIM28Q13263 835 aaKnown RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 MAPK8IP2Q13387 824 aaPredicted RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 TEX35Q5T0J7 233 aa21.96■■□□□ 1.11
PMPCB-204ENST00000444457 DHX40Q8IX18 779 aaKnown RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 LRRN4CLQ8ND94 238 aa21.96■■□□□ 1.11
PMPCB-204ENST00000444457 DDX11Q96FC9 970 aa21.96■■□□□ 1.11
PMPCB-204ENST00000444457 AGXT2Q9BYV1 514 aa21.96■■□□□ 1.11
PMPCB-204ENST00000444457 OSBPL5Q9H0X9 879 aaPredicted RBP21.96■■□□□ 1.11
PMPCB-204ENST00000444457 FBXO3Q9UK99 471 aa21.96■■□□□ 1.11
PMPCB-204ENST00000444457 CTAGE5O15320 804 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 E4F1Q66K89 784 aaPredicted RBP21.95■■□□□ 1.1
PMPCB-204ENST00000444457 A0A0G2JLW4 131 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 E7EWF7 191 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 H3BQV1 296 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 TUBB4AP04350 444 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 PCCAP05165 728 aaPredicted RBP21.95■■□□□ 1.1
PMPCB-204ENST00000444457 IFFO2Q5TF58 517 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 TXLNBQ8N3L3 684 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
PMPCB-204ENST00000444457 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.95■■□□□ 1.1
PMPCB-204ENST00000444457 M0R2C6 588 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 TPM4P67936 248 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 ARHGAP29Q52LW3 1261 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 KIF6Q6ZMV9 814 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 DNAJC10Q8IXB1 793 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 NSUN7Q8NE18 718 aaKnown RBP21.94■■□□□ 1.1
PMPCB-204ENST00000444457 PPP1R13BQ96KQ4 1090 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 PLA2G12BQ9BX93 195 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 AKAP2Q9Y2D5 859 aa21.94■■□□□ 1.1
PMPCB-204ENST00000444457 ITGB4P16144 1822 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms