RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 EVC2Q86UK5 1308 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 A0A0G2JLW4 131 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 FIGNL2A6NMB9 653 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 TTLL8A6PVC2 850 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 IL2RAP01589 272 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 CLN3Q13286 438 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 NME9Q86XW9 330 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.65□□□□□ -0.86
EPHA4-209ENST00000443796 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
EPHA4-209ENST00000443796 SMC1BQ8NDV3 1235 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 ZCRB1Q8TBF4 217 aaKnown RBP9.65□□□□□ -0.86
EPHA4-209ENST00000443796 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.86
EPHA4-209ENST00000443796 XAGE2Q96GT9 111 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 ESYT1Q9BSJ8 1104 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 RRAGCQ9HB90 399 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 MEGF6O75095 1541 aa9.65□□□□□ -0.86
EPHA4-209ENST00000443796 PALLDQ8WX93 1383 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 PLEKHG2Q9H7P9 1386 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L15C9J2P7 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L10C9JJH3 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L13C9JLJ4 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L12C9JPN9 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L11C9JVI0 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L21D6R901 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L18D6R9N7 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L22D6RA61 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L17D6RBQ6 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L19D6RCP7 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L20D6RJB6 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 INHAP05111 366 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 SCNN1DP51172 638 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 USP17L24Q0WX57 530 aa9.64□□□□□ -0.87
EPHA4-209ENST00000443796 BRCA1P38398 1863 aaKnown RBP9.64□□□□□ -0.87
EPHA4-209ENST00000443796 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 FAM196BA6NMK8 535 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 MAN1A2O60476 641 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 MMP10P09238 476 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 TGFB2P61812 414 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 CENPCQ03188 943 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 DPYDQ12882 1025 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 PTK7Q13308 1070 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 IP6K1Q92551 441 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 ZNF358Q9NW07 568 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 TNRC6CQ9HCJ0 1690 aaKnown RBP9.63□□□□□ -0.87
EPHA4-209ENST00000443796 RGPD2P0DJD1 1756 aa9.63□□□□□ -0.87
EPHA4-209ENST00000443796 SFI1A8K8P3 1242 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 BACH1O14867 736 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 DPEP1P16444 411 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 SSFA2P28290 1259 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
EPHA4-209ENST00000443796 TLR1Q15399 786 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 ANKMY2Q8IV38 441 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 TRIM47Q96LD4 638 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 RAB3GAP2Q9H2M9 1393 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
EPHA4-209ENST00000443796 ARFGEF1Q9Y6D6 1849 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 POTECB2RU33 542 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 HMGB2P26583 209 aaKnown RBP9.61□□□□□ -0.87
EPHA4-209ENST00000443796 RNF144AP50876 292 aaPredicted RBP9.61□□□□□ -0.87
EPHA4-209ENST00000443796 SEC13P55735 322 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 SIX5Q8N196 739 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 NOVA2Q9UNW9 492 aaKnown RBP9.61□□□□□ -0.87
EPHA4-209ENST00000443796 NSD3Q9BZ95 1437 aa9.61□□□□□ -0.87
EPHA4-209ENST00000443796 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
EPHA4-209ENST00000443796 KCNA3P22001 575 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-209ENST00000443796 ZNF787Q6DD87 383 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 MPRIPQ6WCQ1 1025 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 LINC00116Q8NCU8 138 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 ZSCAN10Q96SZ4 725 aaPredicted RBP9.6□□□□□ -0.87
EPHA4-209ENST00000443796 RNF181Q9P0P0 153 aa9.6□□□□□ -0.87
EPHA4-209ENST00000443796 MAP2P11137 1827 aaKnown RBP9.6□□□□□ -0.87
EPHA4-209ENST00000443796 SBF1O95248 1867 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 FOXN1O15353 648 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 ATG7O95352 703 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 GPC1P35052 558 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 SMTNP53814 917 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
EPHA4-209ENST00000443796 RNF217Q8TC41 542 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 HINFPQ9BQA5 517 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 DNMT3LQ9UJW3 386 aa9.59□□□□□ -0.87
EPHA4-209ENST00000443796 ITGB4P16144 1822 aa9.59□□□□□ -0.88
EPHA4-209ENST00000443796 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
EPHA4-209ENST00000443796 SMARCC1Q92922 1105 aaPredicted RBP9.58□□□□□ -0.88
EPHA4-209ENST00000443796 DCAF5Q96JK2 942 aa9.58□□□□□ -0.88
EPHA4-209ENST00000443796 GRIP2Q9C0E4 1043 aa9.58□□□□□ -0.88
EPHA4-209ENST00000443796 PRDM10Q9NQV6 1147 aa9.58□□□□□ -0.88
EPHA4-209ENST00000443796 A6NJY4 79 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 DKK1O94907 266 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 HOXC9P31274 260 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
EPHA4-209ENST00000443796 NBPF6Q5VWK0 638 aa9.57□□□□□ -0.88
EPHA4-209ENST00000443796 TSEN2Q8NCE0 465 aaKnown RBP9.57□□□□□ -0.88
EPHA4-209ENST00000443796 NBPF4Q96M43 638 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms