RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 XRN1Q8IZH2 1706 aaKnown RBP12.37□□□□□ -0.43
SYNE2-206ENST00000441438 GTPBP10A4D1E9 387 aaKnown RBP12.37□□□□□ -0.43
SYNE2-206ENST00000441438 ADD2P35612 726 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 CASP2P42575 452 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 CCDC158Q5M9N0 1113 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 ERAP2Q6P179 960 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 SH3KBP1Q96B97 665 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SYNE2-206ENST00000441438 NDUFV2P19404 249 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 PSMA3P25788 255 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 CTHP32929 405 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 SCNN1AP37088 669 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 BHMTQ93088 406 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 ZMYM3Q14202 1370 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-206ENST00000441438 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYNE2-206ENST00000441438 TMOD4Q9NZQ9 345 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 RNF123Q5XPI4 1314 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 GRAMD1BQ3KR37 738 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 KIAA1614Q5VZ46 1190 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
SYNE2-206ENST00000441438 C11orf74Q86VG3 221 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 TAGLN3Q9UI15 199 aa12.36□□□□□ -0.43
SYNE2-206ENST00000441438 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 B4GALNT3Q6L9W6 998 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 E2F7Q96AV8 911 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 PCDHGA4Q9Y5G9 962 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-206ENST00000441438 XRCC5P13010 732 aaKnown RBP12.35□□□□□ -0.43
SYNE2-206ENST00000441438 PARP10Q53GL7 1025 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 ZNF713Q8N859 430 aaPredicted RBP12.35□□□□□ -0.43
SYNE2-206ENST00000441438 CLTCL1P53675 1640 aa12.35□□□□□ -0.43
SYNE2-206ENST00000441438 NKTRP30414 1462 aaKnown RBP12.34□□□□□ -0.43
SYNE2-206ENST00000441438 H0Y3Z8 333 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 BAIAP3O94812 1187 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 KIF2CQ99661 725 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 CHD2O14647 1828 aaKnown RBP12.34□□□□□ -0.43
SYNE2-206ENST00000441438 SMARCA1P28370 1054 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 SEC13P55735 322 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 ESCO1Q5FWF5 840 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 TRIML1Q8N9V2 468 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 BPIFB3P59826 476 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 RASGRP2Q7LDG7 609 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 PGBD3Q8N328 593 aa12.34□□□□□ -0.43
SYNE2-206ENST00000441438 SMG6Q86US8 1419 aaKnown RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 A6NCN8 305 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 MDM2Q00987 491 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 PPP2R5AQ15172 486 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 NBPF8Q3BBV2 869 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 MORC1Q86VD1 984 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 RELTQ969Z4 430 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 DLC1Q96QB1 1528 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 GLULP15104 373 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 RASA1P20936 1047 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 SNX16P57768 344 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 EIF4G2P78344 907 aaKnown RBP eCLIP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 MTERF4Q7Z6M4 381 aaKnown RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 SH3TC2Q8TF17 1288 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 STK32AQ8WU08 396 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 RRAGDQ9NQL2 400 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 SLAIN2Q9P270 581 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 RRP15Q9Y3B9 282 aaKnown RBP12.33□□□□□ -0.44
SYNE2-206ENST00000441438 KNSTRNQ9Y448 316 aa12.33□□□□□ -0.44
SYNE2-206ENST00000441438 NEXMIFQ5QGS0 1516 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 NRXN3Q9Y4C0 1643 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 PRRT4C9JH25 899 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 TSPAN6O43657 245 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 TMEM164Q5U3C3 297 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 UNC5DQ6UXZ4 953 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 ZNF69Q9UC07 566 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 MYL1P05976 194 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 NOS2P35228 1153 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 CLCN1P35523 988 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 KCNV1Q6PIU1 500 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 IFNL3Q8IZI9 196 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 LUZP4Q9P127 313 aa12.32□□□□□ -0.44
SYNE2-206ENST00000441438 C14orf80Q86SX3 495 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 SPAG5Q96R06 1193 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 NOL10Q9BSC4 688 aaKnown RBP12.31□□□□□ -0.44
SYNE2-206ENST00000441438 ADGRB2O60241 1585 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 MMEP08473 750 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 CEBPAP49715 358 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-206ENST00000441438 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 SNX21Q969T3 373 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 PGBD4Q96DM1 585 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 RPAP3Q9H6T3 665 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-206ENST00000441438 CCSER2Q9H7U1 834 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 RFC5P40937 340 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 SLMAPQ14BN4 828 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 IPCEF1Q8WWN9 437 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-206ENST00000441438 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
SYNE2-206ENST00000441438 NCAM1P13591 858 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms