RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CTDNEP1O95476 244 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 FGAP02671 866 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 GPTP24298 496 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 SIK1P57059 783 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 SCARF1Q14162 830 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 MTA3Q9BTC8 594 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 RCOR1Q9UKL0 485 aa9.66□□□□□ -0.86
SPIRE1-204ENST00000440472 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 GPAA1O43292 621 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 ZNF500O60304 480 aaPredicted RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 CAVIN2O95810 425 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 SLC5A1P13866 664 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 CRKLP46109 303 aaKnown RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 CCDC102BQ68D86 513 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 NCOA7Q8NI08 942 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 TIAM2Q8IVF5 1701 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 MYH14Q7Z406 1995 aaKnown RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 JAK2O60674 1132 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 IGSF3O75054 1194 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 FGD1P98174 961 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 CCDC152Q4G0S7 254 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 SUSD4Q5VX71 490 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 SYNE4Q8N205 404 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 SPATA32Q96LK8 384 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 PUS7LQ9H0K6 701 aaKnown RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 ZNF652Q9Y2D9 606 aa9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 ZNF330Q9Y3S2 320 aaPredicted RBP9.65□□□□□ -0.86
SPIRE1-204ENST00000440472 PTPDC1A2A3K4 754 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 H3BQV1 296 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 NTSR2O95665 410 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 CCDC192P0DO97 292 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 APOBRQ0VD83 1088 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 TMED8Q6PL24 325 aaPredicted RBP9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 ZNF396Q96N95 335 aaPredicted RBP9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 CDC5LQ99459 802 aaKnown RBP9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 NID2Q14112 1375 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 PNPLA7Q6ZV29 1317 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 CNTNAP4Q9C0A0 1308 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 ZNF213O14771 459 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 ATP6V1AP38606 617 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 TERF1P54274 439 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 STK3Q13188 491 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 MAP3K11Q16584 847 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 FOXD4L6Q3SYB3 417 aaPredicted RBP9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 FOXD4L3Q6VB84 417 aaPredicted RBP9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 TMEM87BQ96K49 555 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 CLSTN2Q9H4D0 955 aa9.64□□□□□ -0.87
SPIRE1-204ENST00000440472 BCL9LQ86UU0 1499 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 CTAGE5O15320 804 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 PDE6AP16499 860 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 GNAT2P19087 354 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 SF3B3Q15393 1217 aaKnown RBP9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 SLFNL1Q499Z3 407 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 SLC10A5Q5PT55 438 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 RC3H1Q5TC82 1133 aaKnown RBP9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 NUP62CLQ9H1M0 184 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 PIH1D3Q9NQM4 214 aaKnown RBP9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 ZKSCAN5Q9Y2L8 839 aa9.63□□□□□ -0.87
SPIRE1-204ENST00000440472 PATL2C9JE40 543 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 PRC1O43663 620 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 PHKA1P46020 1223 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 ANTXR2P58335 489 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 MAP3K12Q12852 859 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 ITPK1Q13572 414 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 TTLL5Q6EMB2 1281 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 RALYLQ86SE5 291 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 STRBPQ96SI9 672 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 C4AP0C0L4 1744 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 SCN7AQ01118 1682 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 A0A1B0GUL6 1792 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 PDS5AQ29RF7 1337 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 GOLGA6L4A6NEF3 574 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 KDM4AO75164 1064 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 TPM3P06753 285 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 MSNP26038 577 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 IGHMBP2P38935 993 aaKnown RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 RCAN1P53805 252 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 TRDNQ13061 729 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 BRAPQ7Z569 592 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 FERMT3Q86UX7 667 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 SGMS1Q86VZ5 419 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 SPATA5Q8NB90 893 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 PGBD1Q96JS3 809 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 MPHOSPH8Q99549 860 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 HPS5Q9UPZ3 1129 aa9.62□□□□□ -0.87
SPIRE1-204ENST00000440472 ZNF804BA4D1E1 1349 aa9.61□□□□□ -0.87
SPIRE1-204ENST00000440472 ZNF532Q9HCE3 1301 aa9.61□□□□□ -0.87
SPIRE1-204ENST00000440472 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
SPIRE1-204ENST00000440472 LIFRP42702 1097 aa9.61□□□□□ -0.87
SPIRE1-204ENST00000440472 VPS72Q15906 364 aa9.61□□□□□ -0.87
SPIRE1-204ENST00000440472 FAM200AQ8TCP9 573 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms