RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 RALYLQ86SE5 291 aaKnown RBP17.9■□□□□ 0.46
CPSF7-205ENST00000439958 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.467e-7■□□□□ 9.5
CPSF7-205ENST00000439958 ADD2P35612 726 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 DDR1Q08345 913 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
CPSF7-205ENST00000439958 TXNRD3Q86VQ6 643 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 ZSWIM6Q9HCJ5 1215 aa17.9■□□□□ 0.46
CPSF7-205ENST00000439958 GOLGA6L22H0YM25 854 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 ZNF213O14771 459 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 TDO2P48775 406 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 KRT32Q14532 448 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 ANKRD36CQ5JPF3 1778 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 ZNF804BA4D1E1 1349 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 HIBADHP31937 336 aaKnown RBP17.89■□□□□ 0.45
CPSF7-205ENST00000439958 NUCB2P80303 420 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.89■□□□□ 0.45
CPSF7-205ENST00000439958 UFL1O94874 794 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 EZH2Q15910 746 aaKnown RBP17.89■□□□□ 0.45
CPSF7-205ENST00000439958 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 TPCN1Q9ULQ1 816 aa17.89■□□□□ 0.45
CPSF7-205ENST00000439958 MYH3P11055 1940 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 RIMBP2O15034 1052 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 ARID4AP29374 1257 aaPredicted RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 DDX11Q96FC9 970 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 NAPBQ9H115 298 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 CIZ1Q9ULV3 898 aaPredicted RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 PRKAB2O43741 272 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 CCT2P78371 535 aaKnown RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 UBE4AQ14139 1066 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 ME3Q16798 604 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 FAM84BQ96KN1 310 aaPredicted RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 MINDY4BA8MYZ0 360 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 TRDNQ13061 729 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 STOX1Q6ZVD7 989 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 DEFB132Q7Z7B7 95 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
CPSF7-205ENST00000439958 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
CPSF7-205ENST00000439958 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 EPB41L2O43491 1005 aaKnown RBP17.87■□□□□ 0.45
CPSF7-205ENST00000439958 RAB3GAP1Q15042 981 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 ANKRD2Q9GZV1 360 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 E7EWF7 191 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 GRAPQ13588 217 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
CPSF7-205ENST00000439958 TTC14Q96N46 770 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 SLC4A4Q9Y6R1 1079 aa17.87■□□□□ 0.45
CPSF7-205ENST00000439958 G3V3G9 751 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 DCAF8Q5TAQ9 597 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 DSCC1Q9BVC3 393 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 INCENPQ9NQS7 918 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 SDR42E1Q8WUS8 393 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.86■□□□□ 0.45
CPSF7-205ENST00000439958 APOBRQ0VD83 1088 aa17.86■□□□□ 0.45
CPSF7-205ENST00000439958 GPHNQ9NQX3 736 aaPredicted RBP17.86■□□□□ 0.45
CPSF7-205ENST00000439958 C4BP0C0L5 1744 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 TUBGCP6Q96RT7 1819 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 GJB2P29033 226 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 NAA16Q6N069 864 aaPredicted RBP17.85■□□□□ 0.45
CPSF7-205ENST00000439958 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 RBM17Q96I25 401 aaKnown RBP17.85■□□□□ 0.45
CPSF7-205ENST00000439958 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
CPSF7-205ENST00000439958 GDPD2Q9HCC8 539 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 RGS17Q9UGC6 210 aaPredicted RBP17.85■□□□□ 0.45
CPSF7-205ENST00000439958 LCORLQ8N3X6 602 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 UTRNP46939 3433 aa17.85■□□□□ 0.45
CPSF7-205ENST00000439958 DZIP1Q86YF9 867 aaKnown RBP17.84■□□□□ 0.45
CPSF7-205ENST00000439958 NLGN1Q8N2Q7 840 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 CHMP4CQ96CF2 233 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 TM6SF1Q9BZW5 370 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 COL5A3P25940 1745 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-205ENST00000439958 CTDSPL2Q05D32 466 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 DENND2AQ9ULE3 1009 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 PRDX5P30044 214 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 TM4SF1P30408 202 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 PPP1R1BQ9UD71 204 aaPredicted RBP17.84■□□□□ 0.45
CPSF7-205ENST00000439958 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
CPSF7-205ENST00000439958 TRAK2O60296 914 aa17.83■□□□□ 0.45
CPSF7-205ENST00000439958 ANKRD1Q15327 319 aa17.83■□□□□ 0.45
CPSF7-205ENST00000439958 NCOA5Q9HCD5 579 aaKnown RBP17.83■□□□□ 0.45
CPSF7-205ENST00000439958 COL4A1P02462 1669 aa17.83■□□□□ 0.44
CPSF7-205ENST00000439958 POLRMTO00411 1230 aaKnown RBP17.83■□□□□ 0.44
CPSF7-205ENST00000439958 DYNLL1P63167 89 aaKnown RBP17.83■□□□□ 0.44
CPSF7-205ENST00000439958 UBE3CQ15386 1083 aa17.83■□□□□ 0.44
CPSF7-205ENST00000439958 AATFQ9NY61 560 aaKnown RBP eCLIP17.83■□□□□ 0.44
CPSF7-205ENST00000439958 SPEF2Q9C093 1822 aa17.83■□□□□ 0.44
CPSF7-205ENST00000439958 RTL9Q8NET4 1388 aa17.83■□□□□ 0.44
CPSF7-205ENST00000439958 DDX11L8A8MPP1 907 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 PRPF40AO75400 957 aaKnown RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 BAG4O95429 457 aaKnown RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 F8W031 263 aaPredicted RBP17.82■□□□□ 0.44
CPSF7-205ENST00000439958 GPSM2P81274 684 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 CCDC144CPQ8IYA2 1237 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 NACAP1Q9BZK3 213 aa17.82■□□□□ 0.44
CPSF7-205ENST00000439958 ANO8Q9HCE9 1232 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms