RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 UBE4AQ14139 1066 aa20.63■□□□□ 0.89
TVP23C-204ENST00000438826 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
TVP23C-204ENST00000438826 KRT27Q7Z3Y8 459 aa20.63■□□□□ 0.89
TVP23C-204ENST00000438826 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
TVP23C-204ENST00000438826 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
TVP23C-204ENST00000438826 FGD1P98174 961 aa20.62■□□□□ 0.89
TVP23C-204ENST00000438826 CELF1Q92879 486 aaKnown RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
TVP23C-204ENST00000438826 PRPF40AO75400 957 aaKnown RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 ZSCAN22P10073 491 aaPredicted RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 PDIA4P13667 645 aaKnown RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 RPS8P62241 208 aaKnown RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 EXOSC10Q01780 885 aaKnown RBP20.62■□□□□ 0.89
TVP23C-204ENST00000438826 SLC27A3Q5K4L6 730 aa20.62■□□□□ 0.89
TVP23C-204ENST00000438826 CARMIL3Q8ND23 1372 aa20.61■□□□□ 0.89
TVP23C-204ENST00000438826 NPHP1O15259 732 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 BRF1Q92994 677 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 CHAMP1Q96JM3 812 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 GNL3LQ9NVN8 582 aaKnown RBP20.6■□□□□ 0.89
TVP23C-204ENST00000438826 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 ZNF804BA4D1E1 1349 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 CASZ1Q86V15 1759 aa20.6■□□□□ 0.89
TVP23C-204ENST00000438826 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
TVP23C-204ENST00000438826 ZNF213O14771 459 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 STK3Q13188 491 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 NFIXQ14938 502 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 CAVIN4Q5BKX8 364 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 MAGEB6Q8N7X4 407 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 GTF3C6Q969F1 213 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 AIDAQ96BJ3 306 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 LRRC2Q9BYS8 371 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 AGXT2Q9BYV1 514 aa20.59■□□□□ 0.89
TVP23C-204ENST00000438826 HAND2P61296 217 aa20.58■□□□□ 0.89
TVP23C-204ENST00000438826 CCDC24Q8N4L8 307 aa20.58■□□□□ 0.89
TVP23C-204ENST00000438826 ATP6V1DQ9Y5K8 247 aa20.58■□□□□ 0.89
TVP23C-204ENST00000438826 TRIM37O94972 964 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 PDCP20941 246 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 TAF1P21675 1872 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 FBXL16Q8N461 479 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 STRBPQ96SI9 672 aaKnown RBP20.58■□□□□ 0.88
TVP23C-204ENST00000438826 ANKRD2Q9GZV1 360 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.88
TVP23C-204ENST00000438826 LAMA4Q16363 1823 aa20.58■□□□□ 0.88
TVP23C-204ENST00000438826 F13A1P00488 732 aa20.57■□□□□ 0.88
TVP23C-204ENST00000438826 APPP05067 770 aa20.57■□□□□ 0.88
TVP23C-204ENST00000438826 GYG1P46976 350 aa20.57■□□□□ 0.88
TVP23C-204ENST00000438826 MTMR6Q9Y217 621 aa20.57■□□□□ 0.88
TVP23C-204ENST00000438826 DOCK2Q92608 1830 aa20.57■□□□□ 0.88
TVP23C-204ENST00000438826 GOLGA6L3A6NEY3 463 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 TM4SF1P30408 202 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 L1TD1Q5T7N2 865 aaKnown RBP20.56■□□□□ 0.88
TVP23C-204ENST00000438826 LARP1BQ659C4 914 aaKnown RBP20.56■□□□□ 0.88
TVP23C-204ENST00000438826 VPS37DQ86XT2 251 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 CNBD1Q8NA66 436 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 A0A1B0GUL6 1792 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 FSD2A1L4K1 749 aa20.56■□□□□ 0.88
TVP23C-204ENST00000438826 WTIPA6NIX2 430 aaPredicted RBP20.56■□□□□ 0.88
TVP23C-204ENST00000438826 PFKFB2O60825 505 aa20.55■□□□□ 0.88
TVP23C-204ENST00000438826 DTNBO60941 627 aa20.55■□□□□ 0.88
TVP23C-204ENST00000438826 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
TVP23C-204ENST00000438826 NCOA7Q8NI08 942 aa20.55■□□□□ 0.88
TVP23C-204ENST00000438826 FAM84BQ96KN1 310 aaPredicted RBP20.55■□□□□ 0.88
TVP23C-204ENST00000438826 IQSEC3Q9UPP2 1182 aaPredicted RBP20.55■□□□□ 0.88
TVP23C-204ENST00000438826 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 MCM5P33992 734 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 APOBRQ0VD83 1088 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 SCRN1Q12765 414 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 ALX1Q15699 326 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 FOXD4L6Q3SYB3 417 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 FOXD4L3Q6VB84 417 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 BRWD3Q6RI45 1802 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 MBD4O95243 580 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 CHST3Q7LGC8 479 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 RALYLQ86SE5 291 aaKnown RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 GPT2Q8TD30 523 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 ZNF274Q96GC6 653 aaPredicted RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
TVP23C-204ENST00000438826 DENND2AQ9ULE3 1009 aa20.54■□□□□ 0.88
TVP23C-204ENST00000438826 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
TVP23C-204ENST00000438826 VPS37CA5D8V6 355 aaPredicted RBP20.53■□□□□ 0.88
TVP23C-204ENST00000438826 GYS1P13807 737 aa20.53■□□□□ 0.88
TVP23C-204ENST00000438826 GNAT2P19087 354 aa20.53■□□□□ 0.88
TVP23C-204ENST00000438826 FBXO33Q7Z6M2 555 aa20.53■□□□□ 0.88
TVP23C-204ENST00000438826 MB21D2Q8IYB1 491 aaPredicted RBP20.53■□□□□ 0.88
TVP23C-204ENST00000438826 UBR3Q6ZT12 1888 aa20.53■□□□□ 0.88
TVP23C-204ENST00000438826 SEMA3EO15041 775 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 MBD3O95983 291 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 TRDNQ13061 729 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
TVP23C-204ENST00000438826 CHMP4CQ96CF2 233 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 ABCF2Q9UG63 623 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 WDR19Q8NEZ3 1342 aa20.52■□□□□ 0.88
TVP23C-204ENST00000438826 EVCP57679 992 aa20.52■□□□□ 0.87
TVP23C-204ENST00000438826 RBM6P78332 1123 aaKnown RBP20.52■□□□□ 0.87
TVP23C-204ENST00000438826 CAVIN1Q6NZI2 390 aaKnown RBP20.52■□□□□ 0.87
TVP23C-204ENST00000438826 NBPF3Q9H094 633 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms