RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 A0A1W2PPC1 479 aa16.17■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 RASEFQ8IZ41 740 aa16.17■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 MS4A4AQ96JQ5 239 aa16.17■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 NR2E3Q9Y5X4 410 aa16.17■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 USP2O75604 605 aaPredicted RBP16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 CHRM1P11229 460 aaPredicted RBP16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ARHGEF6Q15052 776 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 TAF1CQ15572 869 aaPredicted RBP16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 KIAA0825Q8IV33 1275 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 BRI3BPQ8WY22 251 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 CCDC85AQ96PX6 553 aaPredicted RBP16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 STXBP5LQ9Y2K9 1186 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 PCDHAC2Q9Y5I4 1007 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 XDHP47989 1333 aa16.16■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 GTPBP6O43824 516 aaPredicted RBP16.15■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 NBPF12Q5TAG4 269 aaPredicted RBP16.15■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ZFYVE28Q9HCC9 887 aa16.15■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 SPTBN5Q9NRC6 3674 aaKnown RBP16.15■□□□□ 0.18
SMAD9-IT1-201ENST00000437983 ATP2B4P23634 1241 aa16.14■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 STRIP1Q5VSL9 837 aa16.14■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 FAM43AQ8N2R8 423 aa16.14■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 OPTNQ96CV9 577 aa16.14■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 ELP3Q9H9T3 547 aa16.14■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 STK25O00506 426 aa16.13■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 GJA8P48165 433 aa16.13■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 TXNRD3Q86VQ6 643 aa16.13■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 PLBD2Q8NHP8 589 aa16.13■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 MYO3BQ8WXR4 1341 aa16.13■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 COL1A1P02452 1464 aaPredicted RBP16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 UNCXA6NJT0 531 aa16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CTGFP29279 349 aa16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 IREB2P48200 963 aaKnown RBP16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 LACTBP83111 547 aaPredicted RBP16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 MTMR10Q9NXD2 777 aa16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 AOX1Q06278 1338 aa16.12■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CCL15-CCL14A0A0B4J2E2 113 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CLRN2A0PK11 232 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CCL5P13501 91 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CCL15Q16663 113 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 KRT24Q2M2I5 525 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 ANKRD13DQ6ZTN6 518 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 ANKRD13AQ8IZ07 590 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 CHPF2Q9P2E5 772 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 MED23Q9ULK4 1368 aa16.11■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 EVI5O60447 810 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 GJB1P08034 283 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 NFE2L2Q16236 605 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 SUPT20HL1Q3ZLR7 823 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 TTLL5Q6EMB2 1281 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 PLEKHF1Q96S99 279 aa16.1■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 FARP2O94887 1054 aaPredicted RBP16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 DLGAP5Q15398 846 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 GPR153Q6NV75 609 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 ANKRD18AQ8IVF6 992 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 COA1Q9GZY4 146 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 PPP2R3BQ9Y5P8 575 aa16.09■□□□□ 0.17
SMAD9-IT1-201ENST00000437983 OTOFQ9HC10 1997 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 TLR2O60603 784 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 KLRK1P26718 216 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 GTF2IP78347 998 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 KIF22Q14807 665 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 ZBTB38Q8NAP3 1195 aaPredicted RBP16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 PRDM6Q9NQX0 595 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 ZNF804BA4D1E1 1349 aa16.08■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 GRK4P32298 578 aa16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 MMP14P50281 582 aa16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 TRIM28Q13263 835 aaKnown RBP16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 U2AF1L4Q8WU68 220 aaKnown RBP16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 PRMT6Q96LA8 375 aaPredicted RBP16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 GDF15Q99988 308 aa16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 VEZTQ9HBM0 779 aa16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 BCAMP50895 628 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 CCT4P50991 539 aaKnown RBP16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 GTF2A2P52657 109 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 PRMT2P55345 433 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 RASA3Q14644 834 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 CDAN1Q8IWY9 1227 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 TRIM47Q96LD4 638 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 SRRDQ9UH36 339 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 RIPOR2Q9Y4F9 1068 aa16.06■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 GNRH1P01148 92 aa16.05■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 NEFMP07197 916 aa16.05■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 OSBPP22059 807 aa16.05■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 MTMR14Q8NCE2 650 aa16.05■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 UNC93B1Q9H1C4 597 aa16.05■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
SMAD9-IT1-201ENST00000437983 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms