RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 MYH13Q9UKX3 1938 aa25.88■■□□□ 1.73
YBX1-203ENST00000436427 CHAF1AQ13111 956 aaPredicted RBP25.88■■□□□ 1.73
YBX1-203ENST00000436427 TDRD7Q8NHU6 1098 aaKnown RBP25.88■■□□□ 1.73
YBX1-203ENST00000436427 COA1Q9GZY4 146 aa25.88■■□□□ 1.73
YBX1-203ENST00000436427 AOC3Q16853 763 aa25.87■■□□□ 1.73
YBX1-203ENST00000436427 DOK7Q18PE1 504 aa25.87■■□□□ 1.73
YBX1-203ENST00000436427 BACH2Q9BYV9 841 aa25.87■■□□□ 1.73
YBX1-203ENST00000436427 IL1R1P14778 569 aa25.86■■□□□ 1.73
YBX1-203ENST00000436427 CHMLP26374 656 aa25.86■■□□□ 1.73
YBX1-203ENST00000436427 PIH1D3Q9NQM4 214 aaKnown RBP25.86■■□□□ 1.73
YBX1-203ENST00000436427 DIAPH3Q9NSV4 1193 aa25.86■■□□□ 1.73
YBX1-203ENST00000436427 PPIP5K2O43314 1243 aa25.85■■□□□ 1.73
YBX1-203ENST00000436427 JAG2Q9Y219 1238 aa25.85■■□□□ 1.73
YBX1-203ENST00000436427 KIAA2012Q0VF49 1180 aa25.84■■□□□ 1.73
YBX1-203ENST00000436427 ZNF277Q9NRM2 450 aaPredicted RBP25.84■■□□□ 1.73
YBX1-203ENST00000436427 PDS5AQ29RF7 1337 aaKnown RBP25.84■■□□□ 1.73
YBX1-203ENST00000436427 ARFGEF1Q9Y6D6 1849 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 HIP1O00291 1037 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 IDH1O75874 414 aaKnown RBP25.83■■□□□ 1.73
YBX1-203ENST00000436427 TAOK3Q9H2K8 898 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 DBNDD1Q9H9R9 158 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 ABCF2Q9UG63 623 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 RFX7Q2KHR2 1363 aa25.83■■□□□ 1.73
YBX1-203ENST00000436427 ZBTB22O15209 634 aa25.83■■□□□ 1.72
YBX1-203ENST00000436427 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.83■■□□□ 1.72
YBX1-203ENST00000436427 LRRFIP1Q32MZ4 808 aaKnown RBP25.82■■□□□ 1.72
YBX1-203ENST00000436427 CWC27Q6UX04 472 aaKnown RBP25.82■■□□□ 1.72
YBX1-203ENST00000436427 LRP2BPQ9P2M1 347 aa25.82■■□□□ 1.72
YBX1-203ENST00000436427 FER1L6Q2WGJ9 1857 aa25.82■■□□□ 1.72
YBX1-203ENST00000436427 ECE2O60344 883 aa25.81■■□□□ 1.72
YBX1-203ENST00000436427 FBXW7Q969H0 707 aa25.81■■□□□ 1.72
YBX1-203ENST00000436427 SRCAPQ6ZRS2 3230 aa25.8■■□□□ 1.72
YBX1-203ENST00000436427 PODNQ7Z5L7 613 aa25.8■■□□□ 1.72
YBX1-203ENST00000436427 LARGE2Q8N3Y3 721 aa25.8■■□□□ 1.72
YBX1-203ENST00000436427 WDR66Q8TBY9 1149 aa25.8■■□□□ 1.72
YBX1-203ENST00000436427 NFKBIEO00221 500 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 CHGBP05060 677 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 MAP3K12Q12852 859 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 NMIQ13287 307 aaPredicted RBP25.79■■□□□ 1.72
YBX1-203ENST00000436427 ZSCAN25Q6NSZ9 544 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 VPS33BQ9H267 617 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 DOCK2Q92608 1830 aa25.79■■□□□ 1.72
YBX1-203ENST00000436427 RNF113AO15541 343 aaKnown RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 SEC24BO95487 1268 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 IARSP41252 1262 aaKnown RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 GTF2IP78347 998 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 SLC9C2Q5TAH2 1124 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 TICAM2Q86XR7 235 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 RUFY2Q8WXA3 655 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 FAM227BQ96M60 508 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 ESYT1Q9BSJ8 1104 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 RAI14Q9P0K7 980 aa25.78■■□□□ 1.72
YBX1-203ENST00000436427 MYO5AQ9Y4I1 1855 aaKnown RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 ZFYP08048 801 aaPredicted RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 MFAP1P55081 439 aaKnown RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 ZGPATQ8N5A5 531 aaKnown RBP25.78■■□□□ 1.72
YBX1-203ENST00000436427 SALL1Q9NSC2 1324 aa25.77■■□□□ 1.72
YBX1-203ENST00000436427 SLFNL1Q499Z3 407 aa25.77■■□□□ 1.72
YBX1-203ENST00000436427 MYH7P12883 1935 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 FAM205AQ6ZU69 1335 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 A0A0D9SFI3 127 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 RASSF7Q02833 373 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 TTLL5Q6EMB2 1281 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 ERICH6Q7L0X2 663 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 CHD4Q14839 1912 aa25.76■■□□□ 1.71
YBX1-203ENST00000436427 LTBP3Q9NS15 1303 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 PDE6AP16499 860 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 ADD2P35612 726 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 MFSD14BQ5SR56 506 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 SPTY2D1Q68D10 685 aaPredicted RBP25.75■■□□□ 1.71
YBX1-203ENST00000436427 ARHGAP27Q6ZUM4 889 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 MAGEB6Q8N7X4 407 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 TBC1D22AQ8WUA7 517 aa25.75■■□□□ 1.71
YBX1-203ENST00000436427 PRDX5P30044 214 aa25.74■■□□□ 1.71
YBX1-203ENST00000436427 NIM1KQ8IY84 436 aa25.74■■□□□ 1.71
YBX1-203ENST00000436427 IL25Q9H293 177 aa25.74■■□□□ 1.71
YBX1-203ENST00000436427 KCNQ5Q9NR82 932 aa25.74■■□□□ 1.71
YBX1-203ENST00000436427 ZNF532Q9HCE3 1301 aa25.74■■□□□ 1.71
YBX1-203ENST00000436427 SGSM2O43147 1006 aa25.73■■□□□ 1.71
YBX1-203ENST00000436427 EIF5BO60841 1220 aaKnown RBP25.73■■□□□ 1.71
YBX1-203ENST00000436427 LDHBP07195 334 aaKnown RBP25.73■■□□□ 1.71
YBX1-203ENST00000436427 ZMYM1Q5SVZ6 1142 aa25.73■■□□□ 1.71
YBX1-203ENST00000436427 COL4A5P29400 1685 aa25.73■■□□□ 1.71
YBX1-203ENST00000436427 RAD50Q92878 1312 aa25.73■■□□□ 1.71
YBX1-203ENST00000436427 DZIP1Q86YF9 867 aaKnown RBP25.73■■□□□ 1.71
YBX1-203ENST00000436427 SEC62Q99442 399 aaKnown RBP25.73■■□□□ 1.71
YBX1-203ENST00000436427 HELLSQ9NRZ9 838 aa25.73■■□□□ 1.71
YBX1-203ENST00000436427 UBE3CQ15386 1083 aa25.72■■□□□ 1.71
YBX1-203ENST00000436427 MCMDC2Q4G0Z9 681 aa25.72■■□□□ 1.71
YBX1-203ENST00000436427 JDP2Q8WYK2 163 aa25.72■■□□□ 1.71
YBX1-203ENST00000436427 APPBP2Q92624 585 aa25.72■■□□□ 1.71
YBX1-203ENST00000436427 UPF2Q9HAU5 1272 aaKnown RBP25.72■■□□□ 1.71
YBX1-203ENST00000436427 USP17L3A6NCW0 530 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 USP17L4A6NCW7 530 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 YDJCA8MPS7 323 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 REC8O95072 547 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 YBX3P16989 372 aaKnown RBP eCLIP25.71■■□□□ 1.712e-22■□□□□ 8.8
YBX1-203ENST00000436427 MECOMQ03112 1051 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 STRIP1Q5VSL9 837 aa25.71■■□□□ 1.71
YBX1-203ENST00000436427 USP17L1Q7RTZ2 530 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms