RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 FLIIQ13045 1269 aa23.4■■□□□ 1.34
UBXN1-203ENST00000436354 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
UBXN1-203ENST00000436354 C15orf52Q6ZUT6 534 aaKnown RBP23.4■■□□□ 1.34
UBXN1-203ENST00000436354 CERS5Q8N5B7 392 aa23.4■■□□□ 1.34
UBXN1-203ENST00000436354 LINS1Q8NG48 757 aa23.4■■□□□ 1.34
UBXN1-203ENST00000436354 SUPT20HL1Q3ZLR7 823 aa23.39■■□□□ 1.33
UBXN1-203ENST00000436354 DNAAF4Q8WXU2 420 aa23.39■■□□□ 1.33
UBXN1-203ENST00000436354 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.39■■□□□ 1.33
UBXN1-203ENST00000436354 LAMB1P07942 1786 aa23.39■■□□□ 1.33
UBXN1-203ENST00000436354 IRS2Q9Y4H2 1338 aa23.38■■□□□ 1.33
UBXN1-203ENST00000436354 FKBP5Q13451 457 aaPredicted RBP23.38■■□□□ 1.33
UBXN1-203ENST00000436354 ZNF804AQ7Z570 1209 aa23.38■■□□□ 1.33
UBXN1-203ENST00000436354 WNK4Q96J92 1243 aa23.38■■□□□ 1.33
UBXN1-203ENST00000436354 TRIM17Q9Y577 477 aa23.38■■□□□ 1.33
UBXN1-203ENST00000436354 SSC5DA1L4H1 1573 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 SNAP23O00161 211 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 TAF5LO75529 589 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 WWC1Q8IX03 1113 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 CLMNQ96JQ2 1002 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 CACNA1FO60840 1977 aa23.37■■□□□ 1.33
UBXN1-203ENST00000436354 F8W031 263 aaPredicted RBP23.36■■□□□ 1.33
UBXN1-203ENST00000436354 IL1R1P14778 569 aa23.36■■□□□ 1.33
UBXN1-203ENST00000436354 FKBP1AP62942 108 aaKnown RBP23.36■■□□□ 1.33
UBXN1-203ENST00000436354 IFIT5Q13325 482 aaKnown RBP23.36■■□□□ 1.33
UBXN1-203ENST00000436354 CFAP100Q494V2 611 aa23.36■■□□□ 1.33
UBXN1-203ENST00000436354 INTS3Q68E01 1043 aaKnown RBP23.36■■□□□ 1.33
UBXN1-203ENST00000436354 OTOP1Q7RTM1 612 aa23.36■■□□□ 1.33
UBXN1-203ENST00000436354 HELBQ8NG08 1087 aaPredicted RBP23.36■■□□□ 1.33
UBXN1-203ENST00000436354 GCC1Q96CN9 775 aa23.36■■□□□ 1.33
UBXN1-203ENST00000436354 A0A1B0GUL6 1792 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 CLRN2A0PK11 232 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 SPDYE2BA6NHP3 402 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 IGF2BP3O00425 579 aaKnown RBP eCLIP23.35■■□□□ 1.33
UBXN1-203ENST00000436354 SPDYE6P0CI01 402 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 OTUD7BQ6GQQ9 843 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 PRMT6Q96LA8 375 aaPredicted RBP23.35■■□□□ 1.33
UBXN1-203ENST00000436354 PCDHAC2Q9Y5I4 1007 aa23.35■■□□□ 1.33
UBXN1-203ENST00000436354 IL16Q14005 1332 aa23.34■■□□□ 1.33
UBXN1-203ENST00000436354 IREB2P48200 963 aaKnown RBP23.34■■□□□ 1.33
UBXN1-203ENST00000436354 ERO1AQ96HE7 468 aa23.34■■□□□ 1.33
UBXN1-203ENST00000436354 VEZTQ9HBM0 779 aa23.34■■□□□ 1.33
UBXN1-203ENST00000436354 CHMP3Q9Y3E7 222 aa23.34■■□□□ 1.33
UBXN1-203ENST00000436354 FOXO4P98177 505 aa23.33■■□□□ 1.33
UBXN1-203ENST00000436354 NBPF12Q5TAG4 269 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-203ENST00000436354 RBM5P52756 815 aaKnown RBP eCLIP23.32■■□□□ 1.32
UBXN1-203ENST00000436354 ANKRD13AQ8IZ07 590 aa23.32■■□□□ 1.32
UBXN1-203ENST00000436354 USP2O75604 605 aaPredicted RBP23.31■■□□□ 1.32
UBXN1-203ENST00000436354 RASA3Q14644 834 aa23.31■■□□□ 1.32
UBXN1-203ENST00000436354 PTPN22Q9Y2R2 807 aa23.31■■□□□ 1.32
UBXN1-203ENST00000436354 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
UBXN1-203ENST00000436354 CRHR2Q13324 411 aa23.3■■□□□ 1.32
UBXN1-203ENST00000436354 TNFAIP1Q13829 316 aa23.3■■□□□ 1.32
UBXN1-203ENST00000436354 MIER1Q8N108 512 aa23.3■■□□□ 1.32
UBXN1-203ENST00000436354 CCDC57Q2TAC2 916 aa23.29■■□□□ 1.32
UBXN1-203ENST00000436354 CCDC184Q52MB2 194 aa23.29■■□□□ 1.32
UBXN1-203ENST00000436354 NCBP3Q53F19 620 aaKnown RBP23.29■■□□□ 1.32
UBXN1-203ENST00000436354 LDHAL6AQ6ZMR3 332 aa23.29■■□□□ 1.32
UBXN1-203ENST00000436354 CD99L2Q8TCZ2 262 aa23.29■■□□□ 1.32
UBXN1-203ENST00000436354 JAG2Q9Y219 1238 aa23.29■■□□□ 1.32
UBXN1-203ENST00000436354 RBBP6Q7Z6E9 1792 aaKnown RBP23.29■■□□□ 1.32
UBXN1-203ENST00000436354 TESPA1A2RU30 521 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-203ENST00000436354 POTEFA5A3E0 1075 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 PLIN1O60240 522 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 GJA5P36382 358 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 TAF7LQ5H9L4 462 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 EFCC1Q9HA90 598 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 AOX1Q06278 1338 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 FAM205AQ6ZU69 1335 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 FANCIQ9NVI1 1328 aa23.28■■□□□ 1.32
UBXN1-203ENST00000436354 VAMP4O75379 141 aa23.27■■□□□ 1.32
UBXN1-203ENST00000436354 SP3Q02447 781 aa23.27■■□□□ 1.32
UBXN1-203ENST00000436354 BEND3Q5T5X7 828 aa23.27■■□□□ 1.32
UBXN1-203ENST00000436354 CNNM1Q9NRU3 951 aa23.27■■□□□ 1.32
UBXN1-203ENST00000436354 SPDYE2Q495Y8 402 aa23.26■■□□□ 1.31
UBXN1-203ENST00000436354 ARMC5Q96C12 935 aa23.26■■□□□ 1.31
UBXN1-203ENST00000436354 ZNF594Q96JF6 807 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-203ENST00000436354 PTPN18Q99952 460 aa23.26■■□□□ 1.31
UBXN1-203ENST00000436354 SERPINA10Q9UK55 444 aa23.26■■□□□ 1.31
UBXN1-203ENST00000436354 OTOFQ9HC10 1997 aa23.25■■□□□ 1.31
UBXN1-203ENST00000436354 F6X3S4 739 aa23.25■■□□□ 1.31
UBXN1-203ENST00000436354 MFSD14BQ5SR56 506 aa23.25■■□□□ 1.31
UBXN1-203ENST00000436354 OPTNQ96CV9 577 aa23.25■■□□□ 1.31
UBXN1-203ENST00000436354 ELP3Q9H9T3 547 aa23.25■■□□□ 1.31
UBXN1-203ENST00000436354 ZNF70Q9UC06 446 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-203ENST00000436354 TTF2Q9UNY4 1162 aaKnown RBP23.25■■□□□ 1.31
UBXN1-203ENST00000436354 GRM8O00222 908 aa23.24■■□□□ 1.31
UBXN1-203ENST00000436354 EPHA10Q5JZY3 1008 aa23.24■■□□□ 1.31
UBXN1-203ENST00000436354 TDRD7Q8NHU6 1098 aaKnown RBP23.24■■□□□ 1.31
UBXN1-203ENST00000436354 TDRD3Q9H7E2 651 aaKnown RBP23.24■■□□□ 1.31
UBXN1-203ENST00000436354 MRS2Q9HD23 443 aa23.24■■□□□ 1.31
UBXN1-203ENST00000436354 HTTP42858 3142 aa23.23■■□□□ 1.31
UBXN1-203ENST00000436354 UBE4AQ14139 1066 aa23.23■■□□□ 1.31
UBXN1-203ENST00000436354 ARHGEF6Q15052 776 aa23.23■■□□□ 1.31
UBXN1-203ENST00000436354 HIBADHP31937 336 aaKnown RBP23.22■■□□□ 1.31
UBXN1-203ENST00000436354 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
UBXN1-203ENST00000436354 HABP4Q5JVS0 413 aaKnown RBP23.22■■□□□ 1.31
UBXN1-203ENST00000436354 WDR63Q8IWG1 891 aa23.22■■□□□ 1.31
UBXN1-203ENST00000436354 MS4A4AQ96JQ5 239 aa23.22■■□□□ 1.31
UBXN1-203ENST00000436354 C9orf78Q9NZ63 289 aaPredicted RBP23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms