RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NLGN2Q8NFZ4 835 aa27.87■■■□□ 2.05
CPSF4-204ENST00000436336 TDRD7Q8NHU6 1098 aaKnown RBP27.87■■■□□ 2.05
CPSF4-204ENST00000436336 CHD4Q14839 1912 aa27.86■■■□□ 2.05
CPSF4-204ENST00000436336 EIF5BO60841 1220 aaKnown RBP27.86■■■□□ 2.05
CPSF4-204ENST00000436336 CD209Q9NNX6 404 aa27.86■■■□□ 2.05
CPSF4-204ENST00000436336 DIAPH3Q9NSV4 1193 aa27.85■■■□□ 2.05
CPSF4-204ENST00000436336 CCDC88AQ3V6T2 1871 aa27.84■■■□□ 2.05
CPSF4-204ENST00000436336 RIMBP2O15034 1052 aa27.84■■■□□ 2.05
CPSF4-204ENST00000436336 IL1R1P14778 569 aa27.84■■■□□ 2.05
CPSF4-204ENST00000436336 LRRFIP1Q32MZ4 808 aaKnown RBP27.84■■■□□ 2.05
CPSF4-204ENST00000436336 FHDC1Q9C0D6 1143 aaPredicted RBP27.84■■■□□ 2.05
CPSF4-204ENST00000436336 COA1Q9GZY4 146 aa27.84■■■□□ 2.05
CPSF4-204ENST00000436336 PSMD1Q99460 953 aa27.84■■■□□ 2.05
CPSF4-204ENST00000436336 SEC24BO95487 1268 aa27.82■■■□□ 2.04
CPSF4-204ENST00000436336 PIH1D3Q9NQM4 214 aaKnown RBP27.82■■■□□ 2.04
CPSF4-204ENST00000436336 RUFY2Q8WXA3 655 aa27.81■■■□□ 2.04
CPSF4-204ENST00000436336 ESYT1Q9BSJ8 1104 aa27.81■■■□□ 2.04
CPSF4-204ENST00000436336 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.81■■■□□ 2.04
CPSF4-204ENST00000436336 WWC3Q9ULE0 1092 aa27.81■■■□□ 2.04
CPSF4-204ENST00000436336 BCS1LQ9Y276 419 aa27.81■■■□□ 2.04
CPSF4-204ENST00000436336 MAST2Q6P0Q8 1798 aa27.8■■■□□ 2.04
CPSF4-204ENST00000436336 ZFYP08048 801 aaPredicted RBP27.8■■■□□ 2.04
CPSF4-204ENST00000436336 ZSCAN25Q6NSZ9 544 aa27.8■■■□□ 2.04
CPSF4-204ENST00000436336 CWC27Q6UX04 472 aaKnown RBP27.8■■■□□ 2.04
CPSF4-204ENST00000436336 KIAA2012Q0VF49 1180 aa27.79■■■□□ 2.04
CPSF4-204ENST00000436336 G3V3G9 751 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 RNF113AO15541 343 aaKnown RBP27.78■■■□□ 2.04
CPSF4-204ENST00000436336 CHAF1AQ13111 956 aaPredicted RBP27.78■■■□□ 2.04
CPSF4-204ENST00000436336 NMIQ13287 307 aaPredicted RBP27.78■■■□□ 2.04
CPSF4-204ENST00000436336 DCAF8Q5TAQ9 597 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 WDR66Q8TBY9 1149 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 VPS33BQ9H267 617 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 SALL1Q9NSC2 1324 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 IDH1O75874 414 aaKnown RBP27.78■■■□□ 2.04
CPSF4-204ENST00000436336 MFAP1P55081 439 aaKnown RBP27.78■■■□□ 2.04
CPSF4-204ENST00000436336 MAP3K12Q12852 859 aa27.78■■■□□ 2.04
CPSF4-204ENST00000436336 RAD50Q92878 1312 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 PSME4Q14997 1843 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 SGSM2O43147 1006 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 ZGPATQ8N5A5 531 aaKnown RBP27.77■■■□□ 2.04
CPSF4-204ENST00000436336 FAM227BQ96M60 508 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 SYT17Q9BSW7 474 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 LRP2BPQ9P2M1 347 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 ABCF2Q9UG63 623 aa27.77■■■□□ 2.04
CPSF4-204ENST00000436336 DOK7Q18PE1 504 aa27.76■■■□□ 2.03
CPSF4-204ENST00000436336 PODNQ7Z5L7 613 aa27.76■■■□□ 2.03
CPSF4-204ENST00000436336 UPF2Q9HAU5 1272 aaKnown RBP27.76■■■□□ 2.03
CPSF4-204ENST00000436336 A0A0D9SFI3 127 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 PPIP5K2O43314 1243 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 REC8O95072 547 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 ADD2P35612 726 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 AOC3Q16853 763 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 FAM205AQ6ZU69 1335 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 ZNF646O15015 1829 aaPredicted RBP27.75■■■□□ 2.03
CPSF4-204ENST00000436336 IGSF3O75054 1194 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 ZMYM1Q5SVZ6 1142 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 SLC9C2Q5TAH2 1124 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 HELLSQ9NRZ9 838 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 SCN9AQ15858 1988 aa27.75■■■□□ 2.03
CPSF4-204ENST00000436336 CHGBP05060 677 aa27.74■■■□□ 2.03
CPSF4-204ENST00000436336 UBE3CQ15386 1083 aa27.74■■■□□ 2.03
CPSF4-204ENST00000436336 IL25Q9H293 177 aa27.74■■■□□ 2.03
CPSF4-204ENST00000436336 TSHZ2Q9NRE2 1034 aa27.74■■■□□ 2.03
CPSF4-204ENST00000436336 SPTY2D1Q68D10 685 aaPredicted RBP27.73■■■□□ 2.03
CPSF4-204ENST00000436336 ERICH6Q7L0X2 663 aa27.73■■■□□ 2.03
CPSF4-204ENST00000436336 TAOK3Q9H2K8 898 aa27.73■■■□□ 2.03
CPSF4-204ENST00000436336 DBNDD1Q9H9R9 158 aa27.73■■■□□ 2.03
CPSF4-204ENST00000436336 JAG2Q9Y219 1238 aa27.73■■■□□ 2.03
CPSF4-204ENST00000436336 ECE2O60344 883 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 PDE6AP16499 860 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 MCMDC2Q4G0Z9 681 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 TBC1D22AQ8WUA7 517 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 APPBP2Q92624 585 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 ZNF277Q9NRM2 450 aaPredicted RBP27.72■■■□□ 2.03
CPSF4-204ENST00000436336 RAI14Q9P0K7 980 aa27.72■■■□□ 2.03
CPSF4-204ENST00000436336 MAGEB6Q8N7X4 407 aa27.71■■■□□ 2.03
CPSF4-204ENST00000436336 LTBP3Q9NS15 1303 aa27.71■■■□□ 2.03
CPSF4-204ENST00000436336 ZNF532Q9HCE3 1301 aa27.7■■■□□ 2.03
CPSF4-204ENST00000436336 TCRBV5S4A2TA0A5A2 114 aa27.7■■■□□ 2.03
CPSF4-204ENST00000436336 GTF2IP78347 998 aa27.7■■■□□ 2.03
CPSF4-204ENST00000436336 SLFNL1Q499Z3 407 aa27.7■■■□□ 2.03
CPSF4-204ENST00000436336 TMED8Q6PL24 325 aaPredicted RBP27.7■■■□□ 2.03
CPSF4-204ENST00000436336 NFKBIEO00221 500 aa27.7■■■□□ 2.02
CPSF4-204ENST00000436336 IARSP41252 1262 aaKnown RBP27.7■■■□□ 2.02
CPSF4-204ENST00000436336 LARGE2Q8N3Y3 721 aa27.7■■■□□ 2.02
CPSF4-204ENST00000436336 SEC62Q99442 399 aaKnown RBP27.7■■■□□ 2.02
CPSF4-204ENST00000436336 EPB41L2O43491 1005 aaKnown RBP27.69■■■□□ 2.02
CPSF4-204ENST00000436336 TTLL5Q6EMB2 1281 aa27.69■■■□□ 2.02
CPSF4-204ENST00000436336 ANO2Q9NQ90 1003 aa27.69■■■□□ 2.02
CPSF4-204ENST00000436336 MYH2Q9UKX2 1941 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 MAST3O60307 1309 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 LDHBP07195 334 aaKnown RBP27.68■■■□□ 2.02
CPSF4-204ENST00000436336 PRDX5P30044 214 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 MFSD14BQ5SR56 506 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 KIAA1211Q6ZU35 1233 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 OSBP2Q969R2 916 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 COL4A5P29400 1685 aa27.68■■■□□ 2.02
CPSF4-204ENST00000436336 NSUN4Q96CB9 384 aaKnown RBP27.67■■■□□ 2.02
CPSF4-204ENST00000436336 USP26Q9BXU7 913 aa27.67■■■□□ 2.02
CPSF4-204ENST00000436336 CCDC171Q6TFL3 1326 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 752.5 ms