RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 GREM2Q9H772 168 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 CD209Q9NNX6 404 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
NELFE-204ENST00000436289 KCNJ4P48050 445 aa19.31■□□□□ 0.68
NELFE-204ENST00000436289 TAF1CQ15572 869 aaPredicted RBP19.31■□□□□ 0.68
NELFE-204ENST00000436289 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
NELFE-204ENST00000436289 NKX2-3Q8TAU0 364 aa19.31■□□□□ 0.68
NELFE-204ENST00000436289 MS4A4AQ96JQ5 239 aa19.31■□□□□ 0.68
NELFE-204ENST00000436289 MPHOSPH8Q99549 860 aa19.31■□□□□ 0.68
NELFE-204ENST00000436289 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 GJA5P36382 358 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 NEXNQ0ZGT2 675 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 RALBP1Q15311 655 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 CHRDL2Q6WN34 429 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 OPTNQ96CV9 577 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 ZCCHC17Q9NP64 241 aaKnown RBP19.3■□□□□ 0.68
NELFE-204ENST00000436289 SZT2Q5T011 3432 aa19.3■□□□□ 0.68
NELFE-204ENST00000436289 CFAP100Q494V2 611 aa19.29■□□□□ 0.68
NELFE-204ENST00000436289 DPF3Q92784 378 aa19.29■□□□□ 0.68
NELFE-204ENST00000436289 MBIPQ9NS73 344 aa19.29■□□□□ 0.68
NELFE-204ENST00000436289 SSC5DA1L4H1 1573 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
NELFE-204ENST00000436289 RASA3Q14644 834 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 CCDC30Q5VVM6 783 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 KSR2Q6VAB6 950 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 C15orf52Q6ZUT6 534 aaKnown RBP19.28■□□□□ 0.68
NELFE-204ENST00000436289 HELBQ8NG08 1087 aaPredicted RBP19.28■□□□□ 0.68
NELFE-204ENST00000436289 PRMT6Q96LA8 375 aaPredicted RBP19.28■□□□□ 0.68
NELFE-204ENST00000436289 HTATIP2Q9BUP3 242 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 VEZTQ9HBM0 779 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 RBM27Q9P2N5 1060 aaKnown RBP19.28■□□□□ 0.68
NELFE-204ENST00000436289 MAP3K2Q9Y2U5 619 aa19.28■□□□□ 0.68
NELFE-204ENST00000436289 CAP1Q01518 475 aa19.27■□□□□ 0.68
NELFE-204ENST00000436289 ELP3Q9H9T3 547 aa19.27■□□□□ 0.68
NELFE-204ENST00000436289 NR2E3Q9Y5X4 410 aa19.27■□□□□ 0.68
NELFE-204ENST00000436289 ZNF646O15015 1829 aaPredicted RBP19.27■□□□□ 0.68
NELFE-204ENST00000436289 CCL15-CCL14A0A0B4J2E2 113 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 A0A1W2PPC1 479 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 CLRN2A0PK11 232 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 TLR2O60603 784 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 CCL15Q16663 113 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 CERS5Q8N5B7 392 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 BRI3BPQ8WY22 251 aa19.26■□□□□ 0.67
NELFE-204ENST00000436289 H7C1W4 665 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 IGKV5-2P06315 115 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 IL1R1P14778 569 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 CAPN2P17655 700 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 ITGA6P23229 1130 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 GNAI1P63096 354 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 MAP3K9P80192 1104 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 ZNF804AQ7Z570 1209 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 CCDC146Q8IYE0 955 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 PLA2G12BQ9BX93 195 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 CSADQ9Y600 493 aa19.25■□□□□ 0.67
NELFE-204ENST00000436289 KLRK1P26718 216 aa19.24■□□□□ 0.67
NELFE-204ENST00000436289 HOXD10P28358 340 aa19.24■□□□□ 0.67
NELFE-204ENST00000436289 RBM5P52756 815 aaKnown RBP eCLIP19.24■□□□□ 0.67
NELFE-204ENST00000436289 LACTBP83111 547 aaPredicted RBP19.24■□□□□ 0.67
NELFE-204ENST00000436289 CHRNDQ07001 517 aa19.24■□□□□ 0.67
NELFE-204ENST00000436289 CUL9Q8IWT3 2517 aa19.24■□□□□ 0.67
NELFE-204ENST00000436289 RANBP2P49792 3224 aaKnown RBP19.24■□□□□ 0.67
NELFE-204ENST00000436289 PI4KAP2A4QPH2 592 aa19.23■□□□□ 0.67
NELFE-204ENST00000436289 CETPP11597 493 aa19.23■□□□□ 0.67
NELFE-204ENST00000436289 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.23■□□□□ 0.67
NELFE-204ENST00000436289 PI4KAP1Q8N8J0 262 aa19.23■□□□□ 0.67
NELFE-204ENST00000436289 SH3TC2Q8TF17 1288 aa19.23■□□□□ 0.67
NELFE-204ENST00000436289 A0A0C4DFX4 3053 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 F8W031 263 aaPredicted RBP19.22■□□□□ 0.67
NELFE-204ENST00000436289 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
NELFE-204ENST00000436289 MYCP01106 439 aaPredicted RBP19.22■□□□□ 0.67
NELFE-204ENST00000436289 CSF1RP07333 972 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 TNNI2P48788 182 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
NELFE-204ENST00000436289 FAM43AQ8N2R8 423 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 PRO3102Q9H379 93 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 SERPINA10Q9UK55 444 aa19.22■□□□□ 0.67
NELFE-204ENST00000436289 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 NEURL1BA8MQ27 555 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 GJA8P48165 433 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 PCDHAC2Q9Y5I4 1007 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 MYH3P11055 1940 aa19.21■□□□□ 0.67
NELFE-204ENST00000436289 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
NELFE-204ENST00000436289 GJB1P08034 283 aa19.2■□□□□ 0.66
NELFE-204ENST00000436289 MNX1P50219 401 aaPredicted RBP19.2■□□□□ 0.66
NELFE-204ENST00000436289 VGLL4Q14135 290 aa19.2■□□□□ 0.66
NELFE-204ENST00000436289 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.2■□□□□ 0.668e-8■□□□□ 9.6
NELFE-204ENST00000436289 HOOK2Q96ED9 719 aa19.2■□□□□ 0.66
NELFE-204ENST00000436289 ZNF70Q9UC06 446 aaPredicted RBP19.2■□□□□ 0.66
NELFE-204ENST00000436289 IRS2Q9Y4H2 1338 aa19.2■□□□□ 0.66
NELFE-204ENST00000436289 SPDYE5A6NIY4 337 aa19.19■□□□□ 0.66
NELFE-204ENST00000436289 ERO1BQ86YB8 467 aa19.19■□□□□ 0.66
NELFE-204ENST00000436289 TRIM47Q96LD4 638 aa19.19■□□□□ 0.66
NELFE-204ENST00000436289 TEPSINQ96N21 525 aa19.19■□□□□ 0.66
NELFE-204ENST00000436289 SNAPC2Q13487 334 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms