RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 BSNDQ8WZ55 320 aa6.93□□□□□ -1.3
HMGB1P45-201ENST00000435986 TNFRSF25Q93038 417 aa6.93□□□□□ -1.3
HMGB1P45-201ENST00000435986 GPN3Q9UHW5 284 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P45-201ENST00000435986 PCDHGB7Q9Y5F8 929 aa6.93□□□□□ -1.3
HMGB1P45-201ENST00000435986 J3QW42 95 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 OIP5O43482 229 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 GRIN2CQ14957 1233 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 COL13A1Q5TAT6 717 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 TPTE2Q6XPS3 522 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 HFE2Q6ZVN8 426 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 GPRASP2Q96D09 838 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 TMEM74Q96NL1 305 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 SPON2Q9BUD6 331 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 CLEC4MQ9H2X3 399 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 SRA1Q9HD15 236 aaKnown RBP6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
HMGB1P45-201ENST00000435986 CPB1P15086 417 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 RACK1P63244 317 aaKnown RBP6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 PLD4Q96BZ4 506 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 GMLQ99445 158 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 HIRIP3Q9BW71 556 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 TMEM39AQ9NV64 488 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 FRRS1LQ9P0K9 344 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 GDF2Q9UK05 429 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 SLC6A14Q9UN76 642 aa6.91□□□□□ -1.3
HMGB1P45-201ENST00000435986 ADARB2-AS1A8MUL3 147 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 MINDY4BA8MYZ0 360 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 SHISA8B8ZZ34 492 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 GTF2F1P35269 517 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 EIF4A3P38919 411 aaKnown RBP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 ADH7P40394 386 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 GRIA4P48058 902 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 PCBP4P57723 403 aaKnown RBP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 RPS26P62854 115 aaKnown RBP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 KCNMA1Q12791 1236 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 COL9A2Q14055 689 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 LRRC14Q15048 493 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 FAM117BQ6P1L5 589 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 GOLGA6L1Q8N7Z2 621 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 EMILIN2Q9BXX0 1053 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 ZNF576Q9H609 170 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.3
HMGB1P45-201ENST00000435986 ZBTB42B2RXF5 422 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 RGS9O75916 674 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 STK10O94804 968 aaKnown RBP6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 GJA8P48165 433 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 TNNI2P48788 182 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 ARL4DP49703 201 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 LIG3P49916 1009 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 PAK2Q13177 524 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 SPRED3Q2MJR0 410 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 SNAP47Q5SQN1 464 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 TTBK2Q6IQ55 1244 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 NECAB3Q96P71 396 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 MUC3BQ9H195 1237 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 SEC31BQ9NQW1 1179 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 ENAMQ9NRM1 1142 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 GGA1Q9UJY5 639 aa6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.89□□□□□ -1.31
HMGB1P45-201ENST00000435986 ROBO2Q9HCK4 1378 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ELOA3CA0A087WX78 387 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ELOA3DA6NLF2 546 aaPredicted RBP6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 NFKBIEO00221 500 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 FBXO24O75426 580 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 TRPA1O75762 1119 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ACPPP15309 386 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ATP11AP98196 1134 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 RASSF7Q02833 373 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ELOA3BQ3SY89 546 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 ELOA3Q8NG57 546 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 TTC9Q92623 222 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 POP1Q99575 1024 aaKnown RBP6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 SMG9Q9H0W8 520 aaKnown RBP6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 COPRSQ9NQ92 184 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 STRIP2Q9ULQ0 834 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
HMGB1P45-201ENST00000435986 CNTNAP5Q8WYK1 1306 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 METTL12A8MUP2 240 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 RNF225M0QZC1 329 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 EPXP11678 715 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 HOXB4P17483 251 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 CDC27P30260 824 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 LMNB2Q03252 620 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 PCDH1Q08174 1060 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 CCDC84Q86UT8 332 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 FCHSD1Q86WN1 690 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 GALNT6Q8NCL4 622 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 RASGRP4Q8TDF6 673 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 EDARADDQ8WWZ3 215 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 NT5C1AQ9BXI3 368 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 ADAM19Q9H013 955 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 MIR1-1HGQ9H1L0 117 aa6.87□□□□□ -1.31
HMGB1P45-201ENST00000435986 NEURL1BA8MQ27 555 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms