RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 HAUS7Q99871 368 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 DBNDD2Q9BQY9 259 aa22.1■■□□□ 1.13
FAM3A-212ENST00000434658 ALDH8A1Q9H2A2 487 aaPredicted RBP22.1■■□□□ 1.13
FAM3A-212ENST00000434658 GOLGB1Q14789 3259 aaKnown RBP22.09■■□□□ 1.13
FAM3A-212ENST00000434658 PDE8AO60658 829 aa22.09■■□□□ 1.13
FAM3A-212ENST00000434658 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
FAM3A-212ENST00000434658 ARHGAP27Q6ZUM4 889 aa22.09■■□□□ 1.13
FAM3A-212ENST00000434658 ZNF589Q86UQ0 364 aaPredicted RBP22.09■■□□□ 1.13
FAM3A-212ENST00000434658 GPR108Q9NPR9 543 aa22.09■■□□□ 1.13
FAM3A-212ENST00000434658 C21orf2O43822 256 aa22.08■■□□□ 1.13
FAM3A-212ENST00000434658 TAF5LO75529 589 aa22.08■■□□□ 1.13
FAM3A-212ENST00000434658 CCDC83Q8IWF9 413 aa22.08■■□□□ 1.13
FAM3A-212ENST00000434658 ANP32BQ92688 251 aaKnown RBP22.08■■□□□ 1.13
FAM3A-212ENST00000434658 EDC3Q96F86 508 aaKnown RBP22.08■■□□□ 1.13
FAM3A-212ENST00000434658 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
FAM3A-212ENST00000434658 ARFGEF1Q9Y6D6 1849 aa22.08■■□□□ 1.13
FAM3A-212ENST00000434658 RBSNQ9H1K0 784 aa22.08■■□□□ 1.12
FAM3A-212ENST00000434658 SLX4Q8IY92 1834 aa22.08■■□□□ 1.12
FAM3A-212ENST00000434658 LAMB2P55268 1798 aa22.08■■□□□ 1.12
FAM3A-212ENST00000434658 F13A1P00488 732 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ST3GAL1Q11201 340 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ANKRD1Q15327 319 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ME3Q16798 604 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 DDX46Q7L014 1031 aaKnown RBP22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ATG9AQ7Z3C6 839 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 USP48Q86UV5 1035 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 SYAP1Q96A49 352 aaPredicted RBP22.07■■□□□ 1.12
FAM3A-212ENST00000434658 TRIM44Q96DX7 344 aaPredicted RBP22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 ZNF609O15014 1411 aa22.07■■□□□ 1.12
FAM3A-212ENST00000434658 GJB2P29033 226 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 BLOC1S2Q6QNY1 142 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 TICAM2Q86XR7 235 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 CACNA1SQ13698 1873 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 SPEF2Q9C093 1822 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 RPS6KB1P23443 525 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 CLCN1P35523 988 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 TPCN1Q9ULQ1 816 aa22.06■■□□□ 1.12
FAM3A-212ENST00000434658 MYH3P11055 1940 aa22.05■■□□□ 1.12
FAM3A-212ENST00000434658 SYCE3A1L190 88 aa22.05■■□□□ 1.12
FAM3A-212ENST00000434658 IL15P40933 162 aaPredicted RBP22.05■■□□□ 1.12
FAM3A-212ENST00000434658 C7orf43Q8WVR3 580 aa22.05■■□□□ 1.12
FAM3A-212ENST00000434658 CHMP3Q9Y3E7 222 aa22.05■■□□□ 1.12
FAM3A-212ENST00000434658 UTRNP46939 3433 aa22.04■■□□□ 1.12
FAM3A-212ENST00000434658 PDIA4P13667 645 aaKnown RBP22.04■■□□□ 1.12
FAM3A-212ENST00000434658 KRT32Q14532 448 aa22.04■■□□□ 1.12
FAM3A-212ENST00000434658 CCDC85AQ96PX6 553 aaPredicted RBP22.04■■□□□ 1.12
FAM3A-212ENST00000434658 DNAJC2Q99543 621 aaKnown RBP22.04■■□□□ 1.12
FAM3A-212ENST00000434658 ESPNB1AK53 854 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 GADD45BO75293 160 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-212ENST00000434658 CIAO1O76071 339 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 CTSWP56202 376 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 KBTBD3Q8NAB2 608 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 GDPD2Q9HCC8 539 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 MTMR6Q9Y217 621 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 FOXD4L6Q3SYB3 417 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-212ENST00000434658 FOXD4L3Q6VB84 417 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-212ENST00000434658 PLA2G12BQ9BX93 195 aa22.03■■□□□ 1.12
FAM3A-212ENST00000434658 U3KPZ7 1027 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-212ENST00000434658 EYA2O00167 538 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 PPEF1O14829 653 aaPredicted RBP22.02■■□□□ 1.12
FAM3A-212ENST00000434658 GRAPQ13588 217 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 MCMDC2Q4G0Z9 681 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 SOGA3Q5TF21 947 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 OLFM4Q6UX06 510 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 TTLL11Q8NHH1 800 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 GRAPLQ8TC17 118 aaPredicted RBP22.02■■□□□ 1.12
FAM3A-212ENST00000434658 CNPY2Q9Y2B0 182 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 TAF6LQ9Y6J9 622 aa22.02■■□□□ 1.12
FAM3A-212ENST00000434658 BBOX1O75936 387 aa22.01■■□□□ 1.11
FAM3A-212ENST00000434658 COL9A3Q14050 684 aaPredicted RBP22.01■■□□□ 1.11
FAM3A-212ENST00000434658 NDUFB9Q9Y6M9 179 aa22.01■■□□□ 1.11
FAM3A-212ENST00000434658 TOB2Q14106 344 aaPredicted RBP22.01■■□□□ 1.11
FAM3A-212ENST00000434658 NECAB1Q8N987 351 aa22.01■■□□□ 1.11
FAM3A-212ENST00000434658 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
FAM3A-212ENST00000434658 CCDC93Q567U6 631 aa22■■□□□ 1.11
FAM3A-212ENST00000434658 CELF1Q92879 486 aaKnown RBP22■■□□□ 1.11
FAM3A-212ENST00000434658 UBE2HP62256 183 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 PDLIM2Q96JY6 352 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 TAF1P21675 1872 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 CSPP1Q1MSJ5 1256 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 GREM2Q9H772 168 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 PAG1Q9NWQ8 432 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
FAM3A-212ENST00000434658 NFKBIEO00221 500 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 CSF1RP07333 972 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 RASSF7Q02833 373 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 LRRC24Q50LG9 513 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 CC2D2BQ6DHV5 1058 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 TMX4Q9H1E5 349 aaPredicted RBP21.98■■□□□ 1.11
FAM3A-212ENST00000434658 HELLSQ9NRZ9 838 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 FBXO3Q9UK99 471 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 LAMA4Q16363 1823 aa21.98■■□□□ 1.11
FAM3A-212ENST00000434658 PDCP20941 246 aa21.97■■□□□ 1.11
FAM3A-212ENST00000434658 RPS8P62241 208 aaKnown RBP21.97■■□□□ 1.11
FAM3A-212ENST00000434658 CCDC129Q6ZRS4 1044 aa21.97■■□□□ 1.11
FAM3A-212ENST00000434658 SP8Q8IXZ3 490 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms