RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 C19orf57Q0VDD7 668 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
PTPN4-205ENST00000433888 ANKRD34AQ69YU3 496 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 TTC16Q8NEE8 873 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 SLC7A3Q8WY07 619 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 RUSC1Q9BVN2 902 aa8.04□□□□□ -1.12
PTPN4-205ENST00000433888 COBLO75128 1261 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 PHACTR2O75167 634 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 BMP3P12645 472 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 SF3B2Q13435 895 aaKnown RBP8.03□□□□□ -1.12
PTPN4-205ENST00000433888 SNX29Q8TEQ0 813 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 DBNDD2Q9BQY9 259 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 BHLHE41Q9C0J9 482 aaPredicted RBP8.03□□□□□ -1.12
PTPN4-205ENST00000433888 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
PTPN4-205ENST00000433888 EDN3P14138 238 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 USP5P45974 858 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 ARL4DP49703 201 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 EHHADHQ08426 723 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 GJD3Q8N144 294 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 TMPRSS13Q9BYE2 586 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 LATS2Q9NRM7 1088 aa8.02□□□□□ -1.13
PTPN4-205ENST00000433888 ADAMTS4O75173 837 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 DLGAP3O95886 979 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 IKBKEQ14164 716 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 ECM1Q16610 540 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 BEND4Q6ZU67 534 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 SOX17Q9H6I2 414 aaPredicted RBP8.01□□□□□ -1.13
PTPN4-205ENST00000433888 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 HIF3AQ9Y2N7 669 aa8.01□□□□□ -1.13
PTPN4-205ENST00000433888 SART1O43290 800 aaKnown RBP8□□□□□ -1.13
PTPN4-205ENST00000433888 ESRRAP11474 423 aaPredicted RBP8□□□□□ -1.13
PTPN4-205ENST00000433888 AAMPQ13685 434 aa8□□□□□ -1.13
PTPN4-205ENST00000433888 SUGCTQ9HAC7 445 aa8□□□□□ -1.13
PTPN4-205ENST00000433888 AMOTL2Q9Y2J4 779 aa8□□□□□ -1.13
PTPN4-205ENST00000433888 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
PTPN4-205ENST00000433888 TIAF1O95411 115 aa7.99□□□□□ -1.13
PTPN4-205ENST00000433888 SPINK2P20155 84 aa7.99□□□□□ -1.13
PTPN4-205ENST00000433888 MCTP1Q6DN14 999 aa7.99□□□□□ -1.13
PTPN4-205ENST00000433888 INTS5Q6P9B9 1019 aaKnown RBP7.99□□□□□ -1.13
PTPN4-205ENST00000433888 SMG8Q8ND04 991 aaKnown RBP7.99□□□□□ -1.13
PTPN4-205ENST00000433888 SHKBP1Q8TBC3 707 aa7.99□□□□□ -1.13
PTPN4-205ENST00000433888 ANO2Q9NQ90 1003 aa7.99□□□□□ -1.13
PTPN4-205ENST00000433888 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
PTPN4-205ENST00000433888 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
PTPN4-205ENST00000433888 FDX2Q6P4F2 183 aa7.98□□□□□ -1.13
PTPN4-205ENST00000433888 DTX1Q86Y01 620 aa7.98□□□□□ -1.13
PTPN4-205ENST00000433888 NRSN2Q9GZP1 204 aa7.98□□□□□ -1.13
PTPN4-205ENST00000433888 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
PTPN4-205ENST00000433888 SGO2Q562F6 1265 aa7.97□□□□□ -1.13
PTPN4-205ENST00000433888 ASAP3Q8TDY4 903 aa7.97□□□□□ -1.13
PTPN4-205ENST00000433888 KCNF1Q9H3M0 494 aa7.97□□□□□ -1.13
PTPN4-205ENST00000433888 OAS3Q9Y6K5 1087 aaKnown RBP7.97□□□□□ -1.13
PTPN4-205ENST00000433888 METTL12A8MUP2 240 aa7.96□□□□□ -1.14
PTPN4-205ENST00000433888 ABL1P00519 1130 aa7.96□□□□□ -1.14
PTPN4-205ENST00000433888 POLR3DP05423 398 aaPredicted RBP7.96□□□□□ -1.14
PTPN4-205ENST00000433888 MAP4P27816 1152 aaKnown RBP7.96□□□□□ -1.14
PTPN4-205ENST00000433888 EXOSC6Q5RKV6 272 aaKnown RBP7.96□□□□□ -1.14
PTPN4-205ENST00000433888 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
PTPN4-205ENST00000433888 GALNT12Q8IXK2 581 aa7.96□□□□□ -1.14
PTPN4-205ENST00000433888 TCF12Q99081 682 aa7.96□□□□□ -1.14
PTPN4-205ENST00000433888 ICMTO60725 284 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 GRIK1P39086 918 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
PTPN4-205ENST00000433888 NUTM2GQ5VZR2 741 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 CCNJLQ8IV13 435 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 USP26Q9BXU7 913 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 EGFL7Q9UHF1 273 aa7.95□□□□□ -1.14
PTPN4-205ENST00000433888 A0A1W2PP55 124 aa7.94□□□□□ -1.14
PTPN4-205ENST00000433888 WDR64B1ANS9 1081 aa7.94□□□□□ -1.14
PTPN4-205ENST00000433888 ZNF423Q2M1K9 1284 aa7.94□□□□□ -1.14
PTPN4-205ENST00000433888 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
PTPN4-205ENST00000433888 C12orf50Q8NA57 414 aaPredicted RBP7.94□□□□□ -1.14
PTPN4-205ENST00000433888 CYP4F12Q9HCS2 524 aa7.94□□□□□ -1.14
PTPN4-205ENST00000433888 A0A096LPE4 126 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 A0A1W2PPZ6 126 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 GAS2O43903 313 aaKnown RBP7.93□□□□□ -1.14
PTPN4-205ENST00000433888 F13BP05160 661 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 DRD2P14416 443 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 HOXA10P31260 410 aaPredicted RBP7.93□□□□□ -1.14
PTPN4-205ENST00000433888 GRIA4P48058 902 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 GSTM4Q03013 218 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 SHISA5Q8N114 240 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 MFSD14AQ96MC6 490 aa7.93□□□□□ -1.14
PTPN4-205ENST00000433888 CTSBP07858 339 aa7.92□□□□□ -1.14
PTPN4-205ENST00000433888 ARHGAP4P98171 946 aa7.92□□□□□ -1.14
PTPN4-205ENST00000433888 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
PTPN4-205ENST00000433888 C2CD4AQ8NCU7 369 aaPredicted RBP7.92□□□□□ -1.14
PTPN4-205ENST00000433888 USTQ9Y2C2 406 aa7.92□□□□□ -1.14
PTPN4-205ENST00000433888 SOX4Q06945 474 aaPredicted RBP7.91□□□□□ -1.14
PTPN4-205ENST00000433888 PCDH1Q08174 1060 aa7.91□□□□□ -1.14
PTPN4-205ENST00000433888 LCE3BQ5TA77 95 aa7.91□□□□□ -1.14
PTPN4-205ENST00000433888 KIAA0319Q5VV43 1072 aa7.91□□□□□ -1.14
PTPN4-205ENST00000433888 USPL1Q5W0Q7 1092 aa7.91□□□□□ -1.14
PTPN4-205ENST00000433888 EZH1Q92800 747 aaPredicted RBP7.91□□□□□ -1.14
PTPN4-205ENST00000433888 CLEC4MQ9H2X3 399 aaPredicted RBP7.91□□□□□ -1.14
PTPN4-205ENST00000433888 LIN7BQ9HAP6 207 aa7.91□□□□□ -1.14
PTPN4-205ENST00000433888 SERPINB4P48594 390 aa7.9□□□□□ -1.14
PTPN4-205ENST00000433888 FBLIM1Q8WUP2 373 aa7.9□□□□□ -1.14
PTPN4-205ENST00000433888 PIM2Q9P1W9 311 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms