RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 UBN2Q6ZU65 1347 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 RFX7Q2KHR2 1363 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
SMPD4-206ENST00000433118 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
SMPD4-206ENST00000433118 APOBRQ0VD83 1088 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 HSP90AB3PQ58FF7 597 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 ZSCAN25Q6NSZ9 544 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 PI16Q6UXB8 463 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 KBTBD3Q8NAB2 608 aa12.35□□□□□ -0.43
SMPD4-206ENST00000433118 FTOQ9C0B1 505 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMPD4-206ENST00000433118 HMGB1P09429 215 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 INTS5Q6P9B9 1019 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 CNNM1Q9NRU3 951 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 PTPDC1A2A3K4 754 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 PFKFB2O60825 505 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 PPP4R3BQ5MIZ7 849 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 LLPHQ9BRT6 129 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 CCDC87Q9NVE4 849 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 SMARCC2Q8TAQ2 1214 aa12.34□□□□□ -0.43
SMPD4-206ENST00000433118 CDCA7Q9BWT1 371 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-206ENST00000433118 PALLDQ8WX93 1383 aa12.33□□□□□ -0.43
SMPD4-206ENST00000433118 CAVIN2O95810 425 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 IFIT1P09914 478 aaKnown RBP12.33□□□□□ -0.44
SMPD4-206ENST00000433118 IL6STP40189 918 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-206ENST00000433118 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 PAG1Q9NWQ8 432 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 USP21Q9UK80 565 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 SH3TC1Q8TE82 1336 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 PAPPAQ13219 1627 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 SUSD4Q5VX71 490 aa12.33□□□□□ -0.44
SMPD4-206ENST00000433118 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
SMPD4-206ENST00000433118 BECN2A8MW95 431 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 MEX3CQ5U5Q3 659 aaKnown RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 NAA16Q6N069 864 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 C11orf57Q6ZUT1 292 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CHST3Q7LGC8 479 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 EIF5P55010 431 aaKnown RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CBX1P83916 185 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 SCARF1Q14162 830 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 STX1AQ16623 288 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 SMAP1Q8IYB5 467 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 XAGE2Q96GT9 111 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 NIP7Q9Y221 180 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 LAMA4Q16363 1823 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CTDNEP1O95476 244 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 TNNT1P13805 278 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 ME1P48163 572 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CTSWP56202 376 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 TPD52L1Q16890 204 aaPredicted RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
SMPD4-206ENST00000433118 USP28Q96RU2 1077 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
SMPD4-206ENST00000433118 CTAGE5O15320 804 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 ADD1P35611 737 aaKnown RBP12.31□□□□□ -0.44
SMPD4-206ENST00000433118 CCDC144BQ3MJ40 725 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 CCDC144CPQ8IYA2 1237 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 ZNF396Q96N95 335 aaPredicted RBP12.31□□□□□ -0.44
SMPD4-206ENST00000433118 GOLPH3LQ9H4A5 285 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 HELLSQ9NRZ9 838 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 E7EWF7 191 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 TTC39AQ5SRH9 613 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 FBXW7Q969H0 707 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 DSCC1Q9BVC3 393 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 RCOR1Q9UKL0 485 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 A0A087WWV3 80 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 IQCB1Q15051 598 aa12.31□□□□□ -0.44
SMPD4-206ENST00000433118 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
SMPD4-206ENST00000433118 MYH15Q9Y2K3 1946 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 COL22A1Q8NFW1 1626 aaPredicted RBP12.3□□□□□ -0.44
SMPD4-206ENST00000433118 TJP1Q07157 1748 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 CSF1RP07333 972 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 ZNF592Q92610 1267 aa12.3□□□□□ -0.44
SMPD4-206ENST00000433118 CTIFO43310 598 aaKnown RBP12.29□□□□□ -0.44
SMPD4-206ENST00000433118 CDC25BP30305 580 aa12.29□□□□□ -0.44
SMPD4-206ENST00000433118 EXOSC10Q01780 885 aaKnown RBP12.29□□□□□ -0.44
SMPD4-206ENST00000433118 LINC00116Q8NCU8 138 aa12.29□□□□□ -0.44
SMPD4-206ENST00000433118 ERCC4Q92889 916 aaPredicted RBP12.29□□□□□ -0.44
SMPD4-206ENST00000433118 SMTNL1A8MU46 457 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms