RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 NBPF7P0C2Y1 421 aaPredicted RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 HMGB2P26583 209 aaKnown RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 ALDH3A1P30838 453 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 FAM160A1Q05DH4 1040 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 TMTC2Q8N394 836 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 IFT81Q8WYA0 676 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 VCXQ9H320 206 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 MBIPQ9NS73 344 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 THOC2Q8NI27 1593 aaKnown RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 TTC41PQ6P2S7 1318 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 GOLGA6BA6NDN3 693 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 ARHGAP6O43182 974 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 NOL3O60936 208 aaKnown RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 AFMP43652 599 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 RUFY4Q6ZNE9 571 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CROCCP2Q86T23 111 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CCDC82Q8N4S0 544 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 JAKMIP2Q96AA8 810 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CBX8Q9HC52 389 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 BCS1LQ9Y276 419 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 KLF18A0A0U1RQI7 1052 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 EXOC5O00471 708 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 HSP90AA4PQ58FG1 418 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 TCERG1LQ5VWI1 586 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 RPGRQ92834 1020 aaKnown RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 HDAC9Q9UKV0 1011 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 TTC21AQ8NDW8 1320 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CD109Q6YHK3 1445 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 ATP2A1O14983 1001 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 ZBTB43O43298 467 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 FERP16591 822 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 UBXN1Q04323 297 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 LRCH2Q5VUJ6 765 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 IFT20Q8IY31 132 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 KCNH5Q8NCM2 988 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CCDC26Q8TAB7 109 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 SPAG5Q96R06 1193 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 TMOD2Q9NZR1 351 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 NEBLO76041 1014 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CCDC122Q5T0U0 273 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CCDC85AQ96PX6 553 aaPredicted RBP6.99□□□□□ -1.29
CHD8-202ENST00000430710 CLSTN2Q9H4D0 955 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 MKNK2Q9HBH9 465 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 CTTNBP2Q8WZ74 1663 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 ANKIB1Q9P2G1 1089 aa6.99□□□□□ -1.29
CHD8-202ENST00000430710 MARCKSP29966 332 aaPredicted RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 PRKG1Q13976 671 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MCMDC2Q4G0Z9 681 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MIPOL1Q8TD10 442 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 DDX17Q92841 729 aaKnown RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 TTC21BQ7Z4L5 1316 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 RANBP6O60518 1105 aaKnown RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 IDEP14735 1019 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 CYP26C1Q6V0L0 522 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 CEP128Q6ZU80 1094 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MRPL50Q8N5N7 158 aaKnown RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 UBLCP1Q8WVY7 318 aaPredicted RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 RPGRIP1Q96KN7 1286 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 STARD3NLO95772 234 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 ACTN2P35609 894 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 SH2D4BQ5SQS7 431 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MFSD6Q6ZSS7 791 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 TSNARE1Q96NA8 513 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MEIS3Q99687 375 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 EFCC1Q9HA90 598 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 ABCF2Q9UG63 623 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 BIVM-ERCC5R4GMW8 1640 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 VIMP08670 466 aaKnown RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 KRT13P13646 458 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 C17orf53Q8N3J3 647 aaPredicted RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 NUDT16Q96DE0 195 aaKnown RBP6.98□□□□□ -1.29
CHD8-202ENST00000430710 MYD88Q99836 296 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 PRC1O43663 620 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 AMOTQ4VCS5 1084 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 CCDC110Q8TBZ0 833 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 SLC8A1P32418 973 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 ATP8B2P98198 1209 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 CCDC144CPQ8IYA2 1237 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 NEK11Q8NG66 645 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 KRT23Q9C075 422 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 MED4Q9NPJ6 270 aa6.98□□□□□ -1.29
CHD8-202ENST00000430710 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.98□□□□□ -1.294e-7■■□□□ 13.5
CHD8-202ENST00000430710 IBTKQ9P2D0 1353 aaPredicted RBP6.97□□□□□ -1.29
CHD8-202ENST00000430710 EFCAB8A8MWE9 144 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 ATP8B1O43520 1251 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 IFIT5Q13325 482 aaKnown RBP6.97□□□□□ -1.29
CHD8-202ENST00000430710 FAM182BQ5T319 152 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 FBXO31Q5XUX0 539 aaPredicted RBP6.97□□□□□ -1.29
CHD8-202ENST00000430710 C8orf74Q6P047 294 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.97□□□□□ -1.299e-7■■■□□ 15.2
CHD8-202ENST00000430710 KIAA1524Q8TCG1 905 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 CABS1Q96KC9 395 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 FERMT1Q9BQL6 677 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 CNNM2Q9H8M5 875 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 IFT140Q96RY7 1462 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 CHMLP26374 656 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 CREB3L3Q68CJ9 461 aa6.97□□□□□ -1.29
CHD8-202ENST00000430710 SEC62Q99442 399 aaKnown RBP6.97□□□□□ -1.29
CHD8-202ENST00000430710 LLPHQ9BRT6 129 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms