RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 LRRC8AQ8IWT6 810 aa13.44□□□□□ -0.26
LINC01238-203ENST00000429456 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
LINC01238-203ENST00000429456 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
LINC01238-203ENST00000429456 PCDHA7Q9UN72 937 aa13.44□□□□□ -0.26
LINC01238-203ENST00000429456 DDX60Q8IY21 1712 aaKnown RBP13.43□□□□□ -0.26
LINC01238-203ENST00000429456 NEMFO60524 1076 aa13.43□□□□□ -0.26
LINC01238-203ENST00000429456 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
LINC01238-203ENST00000429456 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC01238-203ENST00000429456 TTC39AQ5SRH9 613 aa13.43□□□□□ -0.26
LINC01238-203ENST00000429456 ADALQ6DHV7 355 aa13.43□□□□□ -0.26
LINC01238-203ENST00000429456 MRPS27Q92552 414 aaKnown RBP13.43□□□□□ -0.26
LINC01238-203ENST00000429456 GPHNQ9NQX3 736 aaPredicted RBP13.43□□□□□ -0.26
LINC01238-203ENST00000429456 TNS2Q63HR2 1409 aa13.43□□□□□ -0.26
LINC01238-203ENST00000429456 A0A1W2PQ27 194 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 A0A1W2PQ64 194 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 A0A1W2PQD8 194 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 BECN2A8MW95 431 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 ADORA1P30542 326 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 RBM6P78332 1123 aaKnown RBP13.42□□□□□ -0.26
LINC01238-203ENST00000429456 IMMTQ16891 758 aaKnown RBP13.42□□□□□ -0.26
LINC01238-203ENST00000429456 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-203ENST00000429456 SMAP1Q8IYB5 467 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-203ENST00000429456 XAGE2Q96GT9 111 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 C16orf45Q96MC5 204 aaPredicted RBP13.42□□□□□ -0.26
LINC01238-203ENST00000429456 AKAP2Q9Y2D5 859 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 WDR17Q8IZU2 1322 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 TNNT1P13805 278 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 CCDC57Q2TAC2 916 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
LINC01238-203ENST00000429456 MYH7P12883 1935 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 A0A087WWV3 80 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 PRC1O43663 620 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 FGAP02671 866 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 TCIRG1Q13488 830 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 CEP57L1Q8IYX8 460 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 HPS5Q9UPZ3 1129 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 HAND2P61296 217 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 SYCP1Q15431 976 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
LINC01238-203ENST00000429456 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 OTUD7BQ6GQQ9 843 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 APPBP2Q92624 585 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 C8orf76Q96K31 380 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 PLA2G12BQ9BX93 195 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 POLR3EQ9NVU0 708 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
LINC01238-203ENST00000429456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
LINC01238-203ENST00000429456 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 DHX16O60231 1041 aaKnown RBP13.4□□□□□ -0.26
LINC01238-203ENST00000429456 YEATS4O95619 227 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 ANTXR2P58335 489 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 TRIM28Q13263 835 aaKnown RBP13.4□□□□□ -0.26
LINC01238-203ENST00000429456 SCARF1Q14162 830 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 ARID5BQ14865 1188 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 PDCL2Q8N4E4 241 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 KCNG4Q8TDN1 519 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
LINC01238-203ENST00000429456 CLIC4Q9Y696 253 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 SHANK3Q9BYB0 1731 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 WDR19Q8NEZ3 1342 aa13.4□□□□□ -0.26
LINC01238-203ENST00000429456 A0A1B0GVL5 298 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 ZAP70P43403 619 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 NDUFA8P51970 172 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 STK38Q15208 465 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 BRAPQ7Z569 592 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 AOPEPQ8N6M6 819 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 NCOA7Q8NI08 942 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 PUS7LQ9H0K6 701 aaKnown RBP13.39□□□□□ -0.27
LINC01238-203ENST00000429456 ORC3Q9UBD5 711 aaPredicted RBP13.39□□□□□ -0.27
LINC01238-203ENST00000429456 NEDD4P46934 1319 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 GOLGA8BA8MQT2 603 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
LINC01238-203ENST00000429456 CSF1RP07333 972 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 MYSM1Q5VVJ2 828 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
LINC01238-203ENST00000429456 SDF4Q9BRK5 362 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 C4AP0C0L4 1744 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
LINC01238-203ENST00000429456 TULP1O00294 542 aaPredicted RBP13.38□□□□□ -0.27
LINC01238-203ENST00000429456 SPTLC2O15270 562 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 POLR3DP05423 398 aaPredicted RBP13.38□□□□□ -0.27
LINC01238-203ENST00000429456 CCZ1BP86790 482 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
LINC01238-203ENST00000429456 NCBP1Q09161 790 aaKnown RBP13.38□□□□□ -0.27
LINC01238-203ENST00000429456 SF3A1Q15459 793 aaKnown RBP13.38□□□□□ -0.27
LINC01238-203ENST00000429456 RGS22Q8NE09 1264 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 AKAP11Q9UKA4 1901 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 GPAA1O43292 621 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 SKILP12757 684 aa13.38□□□□□ -0.27
LINC01238-203ENST00000429456 ATP2B3Q16720 1220 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms