RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 GSDMDP57764 484 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 CEP57Q86XR8 500 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 N4BP2L2Q92802 583 aaPredicted RBP16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 NRBP1Q9UHY1 535 aa16.59■□□□□ 0.25
SYNGAP1-203ENST00000428982 PES1O00541 588 aaKnown RBP16.58■□□□□ 0.25
SYNGAP1-203ENST00000428982 PHACTR2O75167 634 aa16.58■□□□□ 0.25
SYNGAP1-203ENST00000428982 HOXB7P09629 217 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 TYRO3Q06418 890 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 CWC27Q6UX04 472 aaKnown RBP16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 TRIM6Q9C030 488 aaPredicted RBP16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 PLA2G4AP47712 749 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 PPP1R42Q7Z4L9 355 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 SLC52A2Q9HAB3 445 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 MYO6Q9UM54 1294 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 RGS12O14924 1447 aa16.58■□□□□ 0.24
SYNGAP1-203ENST00000428982 CAVIN2O95810 425 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 AXIN2Q9Y2T1 843 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 ANXA1P04083 346 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 PHKG2P15735 406 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 INPP5BP32019 993 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 NAT10Q9H0A0 1025 aaKnown RBP16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 LRRFIP1Q32MZ4 808 aaKnown RBP16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 TTC19Q6DKK2 380 aaPredicted RBP16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 ZNF790Q6PG37 636 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 FSD1Q9BTV5 496 aa16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 SUDS3Q9H7L9 328 aaPredicted RBP16.57■□□□□ 0.24
SYNGAP1-203ENST00000428982 PI4KAP2A4QPH2 592 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 EZRP15311 586 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 PI4KAP1Q8N8J0 262 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 FHOD1Q9Y613 1164 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 F13A1P00488 732 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 SETSIPP0DME0 302 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 HSPA4P34932 840 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 SWT1Q5T5J6 900 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 ZKSCAN8Q15776 578 aaPredicted RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 NBPF3Q9H094 633 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 DDX19AQ9NUU7 478 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 GNL3LQ9NVN8 582 aaKnown RBP16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 SH3BP1Q9Y3L3 701 aa16.56■□□□□ 0.24
SYNGAP1-203ENST00000428982 GBP3Q9H0R5 595 aa16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 MAP2P11137 1827 aaKnown RBP16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 G2E3Q7L622 706 aa16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 CACTINQ8WUQ7 758 aaKnown RBP16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 SCP2P22307 547 aa16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 TACO1Q9BSH4 297 aaKnown RBP16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 CARD6Q9BX69 1037 aa16.55■□□□□ 0.24
SYNGAP1-203ENST00000428982 NAIF1Q69YI7 327 aaPredicted RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 MAP3K2Q9Y2U5 619 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 PLEKHG2Q9H7P9 1386 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 NAP1L1P55209 391 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 CTCFLQ8NI51 663 aaPredicted RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 NOC3LQ8WTT2 800 aaKnown RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 MYD88Q99836 296 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 ALDH1L1O75891 902 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 CORO7P57737 925 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 VPS53Q5VIR6 699 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 CFAP45Q9UL16 551 aa16.54■□□□□ 0.24
SYNGAP1-203ENST00000428982 ANKRD26Q9UPS8 1709 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 SGSM2O43147 1006 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 GJB2P29033 226 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 HDXQ7Z353 690 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 SPATA32Q96LK8 384 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 PEX19P40855 299 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 PRPF40BQ6NWY9 871 aaKnown RBP16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 AACSQ86V21 672 aa16.53■□□□□ 0.24
SYNGAP1-203ENST00000428982 IRF6O14896 467 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 EIF4A1P60842 406 aaKnown RBP16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 ACSBG1Q96GR2 724 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 ZDHHC9Q9Y397 364 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 ZNF396Q96N95 335 aaPredicted RBP16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
SYNGAP1-203ENST00000428982 ERVV-2B6SEH9 535 aa16.52■□□□□ 0.23
SYNGAP1-203ENST00000428982 JMYQ8N9B5 988 aa16.52■□□□□ 0.23
SYNGAP1-203ENST00000428982 SSH3Q8TE77 659 aa16.52■□□□□ 0.23
SYNGAP1-203ENST00000428982 OTUD6BQ8N6M0 293 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 PSD3Q9NYI0 1048 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 HMGB2P26583 209 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 ELF1P32519 619 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 ANKRD13DQ6ZTN6 518 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 RPUSD2Q8IZ73 545 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 SH3GL3Q99963 347 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 SF3A1Q15459 793 aaKnown RBP16.51■□□□□ 0.23
SYNGAP1-203ENST00000428982 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms