RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ANO10Q9NW15 660 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 DDX60Q8IY21 1712 aaKnown RBP10.3□□□□□ -0.76
CDH13-202ENST00000428848 MEGF6O75095 1541 aa10.3□□□□□ -0.76
CDH13-202ENST00000428848 PHLPP1O60346 1717 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 USP27XA6NNY8 438 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 VGLL3A8MV65 326 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 ERVV-2B6SEH9 535 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 CEBPZQ03701 1054 aaKnown RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 APOBRQ0VD83 1088 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 USP16Q9Y5T5 823 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 NWD2Q9ULI1 1742 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 NEDD4P46934 1319 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 SOS2Q07890 1332 aaPredicted RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 NAA30Q147X3 362 aaPredicted RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 CHRNA2Q15822 529 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 SAMD1Q6SPF0 538 aaPredicted RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 CCDC73Q6ZRK6 1079 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 ATG9AQ7Z3C6 839 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 UBE3BQ7Z3V4 1068 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 FMR1NBQ8N0W7 255 aaPredicted RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 ZCRB1Q8TBF4 217 aaKnown RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 CABLES1Q8TDN4 633 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
CDH13-202ENST00000428848 TJP1Q07157 1748 aa10.29□□□□□ -0.76
CDH13-202ENST00000428848 A0A1W2PQ27 194 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 A0A1W2PQ64 194 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 A0A1W2PQD8 194 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 CCDC69A6NI79 296 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 E7EWF7 191 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 HSPD1P10809 573 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 SKILP12757 684 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 FDPSP14324 419 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 PDIA3P30101 505 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 FOXO4P98177 505 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 ADALQ6DHV7 355 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 NBPF11Q86T75 865 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 DDX17Q92841 729 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 SECISBP2LQ93073 1101 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 FAM53CQ9NYF3 392 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 CARMIL3Q8ND23 1372 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 NUP188Q5SRE5 1749 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 A0A0G2JLW4 131 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 H7C1W4 665 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 ZBTB22O15209 634 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 KINO60870 393 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 CCAR2Q8N163 923 aaKnown RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 FSIP1Q8NA03 581 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 ZNF397Q8NF99 534 aaPredicted RBP10.28□□□□□ -0.76
CDH13-202ENST00000428848 BPIFA3Q9BQP9 254 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 PCDHA7Q9UN72 937 aa10.28□□□□□ -0.76
CDH13-202ENST00000428848 A0A087WZG4 1122 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 BECN2A8MW95 431 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 CYP27B1O15528 508 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 CCT2P78371 535 aaKnown RBP10.27□□□□□ -0.77
CDH13-202ENST00000428848 PTPN14Q15678 1187 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 SLFNL1Q499Z3 407 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 CEP57L1Q8IYX8 460 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 CHMP4CQ96CF2 233 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 CARD10Q9BWT7 1032 aa10.27□□□□□ -0.77
CDH13-202ENST00000428848 NCOA5Q9HCD5 579 aaKnown RBP10.27□□□□□ -0.77
CDH13-202ENST00000428848 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.77
CDH13-202ENST00000428848 A0A087WWV3 80 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 IL2RBP14784 551 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 GSDMDP57764 484 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 EVA1CP58658 441 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 LMBR1LQ6UX01 489 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 LINC00301Q8NCQ3 95 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 PLBD2Q8NHP8 589 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 MRPS27Q92552 414 aaKnown RBP10.26□□□□□ -0.77
CDH13-202ENST00000428848 ABCA3Q99758 1704 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 IMPACTQ9P2X3 320 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 MAST3O60307 1309 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 GOLIM4O00461 696 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 KCNJ6P48051 423 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 AOPEPQ8N6M6 819 aa10.26□□□□□ -0.77
CDH13-202ENST00000428848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDH13-202ENST00000428848 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
CDH13-202ENST00000428848 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 KIF2AO00139 706 aaPredicted RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 ME1P48163 572 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 FOSBP53539 338 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 IRX3P78415 501 aaPredicted RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 NKX1-1Q15270 411 aaPredicted RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 FILIP1Q7Z7B0 1213 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 RGS22Q8NE09 1264 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 ERO1AQ96HE7 468 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 NAT10Q9H0A0 1025 aaKnown RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
CDH13-202ENST00000428848 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 C4AP0C0L4 1744 aa10.25□□□□□ -0.77
CDH13-202ENST00000428848 C4BP0C0L5 1744 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms