RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 UBE4AQ14139 1066 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 GPR108Q9NPR9 543 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 PIM2Q9P1W9 311 aa11.56□□□□□ -0.56
HMGCLL1-206ENST00000428842 ERC2O15083 957 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 GTF2IP78347 998 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 EVX2Q03828 476 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 STK11IPQ8N1F8 1099 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 FBXO3Q9UK99 471 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 YBX3P16989 372 aaKnown RBP eCLIP11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 PTH1RQ03431 593 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 CAVIN4Q5BKX8 364 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 ANKRD2Q9GZV1 360 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 LTBP1Q14766 1721 aa11.55□□□□□ -0.56
HMGCLL1-206ENST00000428842 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 M0R2C6 588 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 CDC45O75419 566 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 RAD17O75943 681 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 FBXO33Q7Z6M2 555 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 CNTROBQ8N137 903 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 OSBP2Q969R2 916 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 CD209Q9NNX6 404 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 YDJCA8MPS7 323 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 NFKBIEO00221 500 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 HMGB2P26583 209 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 ARID4AP29374 1257 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 DALRD3Q5D0E6 543 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 CERS5Q8N5B7 392 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 MAGEB6Q8N7X4 407 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 ZC3H12CQ9C0D7 883 aaKnown RBP11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 ANO2Q9NQ90 1003 aa11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
HMGCLL1-206ENST00000428842 LRRC37AA6NMS7 1700 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 KIF13BQ9NQT8 1826 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 SOCS7O14512 581 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 BRCA1P38398 1863 aaKnown RBP11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 SCNN1DP51172 638 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 AOX1Q06278 1338 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 ADAMTSL1Q8N6G6 1762 aa11.53□□□□□ -0.56
HMGCLL1-206ENST00000428842 PPIP5K2O43314 1243 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 SLURP2P0DP57 97 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 EVI5LQ96CN4 794 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 RAI14Q9P0K7 980 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 LRP2BPQ9P2M1 347 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 PALD1Q9ULE6 856 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 ARAP2Q8WZ64 1704 aa11.52□□□□□ -0.56
HMGCLL1-206ENST00000428842 ZNF532Q9HCE3 1301 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 PRKAB2O43741 272 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 SLC4A3P48751 1232 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 CCDC88AQ3V6T2 1871 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 SNED1Q8TER0 1413 aa11.52□□□□□ -0.57
HMGCLL1-206ENST00000428842 CPA1P15085 419 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 DYNLL1P63167 89 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 DLEC1Q9Y238 1755 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 G3V3G9 751 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 ECE2O60344 883 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 ATP2B4P23634 1241 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 TGFB2P61812 414 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 TTLL5Q6EMB2 1281 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 KIAA0825Q8IV33 1275 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 LARP6Q9BRS8 491 aaKnown RBP11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 INCENPQ9NQS7 918 aa11.51□□□□□ -0.57
HMGCLL1-206ENST00000428842 MAST3O60307 1309 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 PDE6AP16499 860 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 MECOMQ03112 1051 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 MFSD14BQ5SR56 506 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 ARMT1Q9H993 441 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 FOXP2O15409 715 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 TDRD7Q8NHU6 1098 aaKnown RBP11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 CD2APQ9Y5K6 639 aa11.5□□□□□ -0.57
HMGCLL1-206ENST00000428842 CACNB3P54284 484 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 ZNF804AQ7Z570 1209 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 SDR42E1Q8WUS8 393 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 TMX4Q9H1E5 349 aaPredicted RBP11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 SGSM2O43147 1006 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 HAND2P61296 217 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 AATFQ9NY61 560 aaKnown RBP eCLIP11.49□□□□□ -0.57
HMGCLL1-206ENST00000428842 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
HMGCLL1-206ENST00000428842 TCRBV5S4A2TA0A5A2 114 aa11.48□□□□□ -0.57
HMGCLL1-206ENST00000428842 EGFRP00533 1210 aa11.48□□□□□ -0.57
HMGCLL1-206ENST00000428842 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
HMGCLL1-206ENST00000428842 TCEANC2Q96MN5 208 aa11.48□□□□□ -0.57
HMGCLL1-206ENST00000428842 BRCA2P51587 3418 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms