RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 A0A1B0GUL6 1792 aa15.05■□□□□ -0
ALMS1P1-201ENST00000428767 ZNF804BA4D1E1 1349 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 AOX1Q06278 1338 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 ECM2O94769 699 aaPredicted RBP15.04■□□□□ -0
ALMS1P1-201ENST00000428767 HOXB7P09629 217 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 SUPT20HL1Q3ZLR7 823 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 CCDC146Q8IYE0 955 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 CCDC191Q8NCU4 936 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 OPTNQ96CV9 577 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 ARHGAP39Q9C0H5 1083 aa15.04■□□□□ -0
ALMS1P1-201ENST00000428767 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
ALMS1P1-201ENST00000428767 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
ALMS1P1-201ENST00000428767 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
ALMS1P1-201ENST00000428767 MMP14P50281 582 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 ARHGEF6Q15052 776 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 ANKRD13AQ8IZ07 590 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 BRI3BPQ8WY22 251 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 SHISA4Q96DD7 197 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 PPP2R3BQ9Y5P8 575 aa15.03■□□□□ -0
ALMS1P1-201ENST00000428767 CCL15-CCL14A0A0B4J2E2 113 aa15.02■□□□□ -0
ALMS1P1-201ENST00000428767 CCL15Q16663 113 aa15.02■□□□□ -0
ALMS1P1-201ENST00000428767 CFAP100Q494V2 611 aa15.02■□□□□ -0
ALMS1P1-201ENST00000428767 CERS5Q8N5B7 392 aa15.02■□□□□ -0
ALMS1P1-201ENST00000428767 ZFYVE28Q9HCC9 887 aa15.02■□□□□ -0
ALMS1P1-201ENST00000428767 UNC80Q8N2C7 3258 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 ARAP2Q8WZ64 1704 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 UNCXA6NJT0 531 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 MTFR1Q15390 333 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 TTLL11Q8NHH1 800 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 MS4A4AQ96JQ5 239 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 LEMD3Q9Y2U8 911 aa15.01□□□□□ -0.01
ALMS1P1-201ENST00000428767 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 MYO1BO43795 1136 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 SPDYE6P0CI01 402 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 KCNJ4P48050 445 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 RASA3Q14644 834 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 PRMT6Q96LA8 375 aaPredicted RBP15□□□□□ -0.01
ALMS1P1-201ENST00000428767 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 JAG2Q9Y219 1238 aa15□□□□□ -0.01
ALMS1P1-201ENST00000428767 RBM5P52756 815 aaKnown RBP eCLIP14.99□□□□□ -0.01
ALMS1P1-201ENST00000428767 MTMR14Q8NCE2 650 aa14.99□□□□□ -0.01
ALMS1P1-201ENST00000428767 METTL22Q9BUU2 404 aaPredicted RBP14.99□□□□□ -0.01
ALMS1P1-201ENST00000428767 CD209Q9NNX6 404 aa14.99□□□□□ -0.01
ALMS1P1-201ENST00000428767 SNAP23O00161 211 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 SOX1O00570 391 aaPredicted RBP14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 IGHMBP2P38935 993 aaKnown RBP14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 KIF22Q14807 665 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 CDAN1Q8IWY9 1227 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 LRCH3Q96II8 777 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 PRO3102Q9H379 93 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
ALMS1P1-201ENST00000428767 GTF2A2P52657 109 aa14.97□□□□□ -0.01
ALMS1P1-201ENST00000428767 LACTBP83111 547 aaPredicted RBP14.97□□□□□ -0.01
ALMS1P1-201ENST00000428767 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.97□□□□□ -0.01
ALMS1P1-201ENST00000428767 MBIPQ9NS73 344 aa14.97□□□□□ -0.01
ALMS1P1-201ENST00000428767 MAP3K2Q9Y2U5 619 aa14.97□□□□□ -0.01
ALMS1P1-201ENST00000428767 MGAMO43451 1857 aa14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 VGLL4Q14135 290 aa14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 HTATIP2Q9BUP3 242 aa14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 ANKRD2Q9GZV1 360 aa14.96□□□□□ -0.01
ALMS1P1-201ENST00000428767 CHRNDQ07001 517 aa14.95□□□□□ -0.02
ALMS1P1-201ENST00000428767 MPHOSPH8Q99549 860 aa14.95□□□□□ -0.02
ALMS1P1-201ENST00000428767 NR2E3Q9Y5X4 410 aa14.95□□□□□ -0.02
ALMS1P1-201ENST00000428767 CSADQ9Y600 493 aa14.95□□□□□ -0.02
ALMS1P1-201ENST00000428767 ZBTB7BO15156 539 aaPredicted RBP14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 TLR2O60603 784 aa14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 WDHD1O75717 1129 aaPredicted RBP14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 ITGA6P23229 1130 aa14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 CWF19L2Q2TBE0 894 aaKnown RBP14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 UBE3BQ7Z3V4 1068 aa14.94□□□□□ -0.02
ALMS1P1-201ENST00000428767 TCP10L2B9ZVM9 353 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 BTBD19C9JJ37 291 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 TAF5LO75529 589 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 CCL5P13501 91 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 CTGFP29279 349 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 TNFAIP1Q13829 316 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 UBE2Q1Q7Z7E8 422 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 HELBQ8NG08 1087 aaPredicted RBP14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 NKX2-3Q8TAU0 364 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 TMEM39BQ9GZU3 492 aa14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 TDRD3Q9H7E2 651 aaKnown RBP14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 ZNF70Q9UC06 446 aaPredicted RBP14.93□□□□□ -0.02
ALMS1P1-201ENST00000428767 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 FARP2O94887 1054 aaPredicted RBP14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 GJA8P48165 433 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 PRMT2P55345 433 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 SPDYE2Q495Y8 402 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 ZNF804AQ7Z570 1209 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 RAET1EQ8TD07 263 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 TEPSINQ96N21 525 aa14.92□□□□□ -0.02
ALMS1P1-201ENST00000428767 RNF208Q9H0X6 261 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms