RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
HDAC1-202ENST00000428704 ECE2O60344 883 aa11.03□□□□□ -0.64
HDAC1-202ENST00000428704 NF2P35240 595 aa11.03□□□□□ -0.64
HDAC1-202ENST00000428704 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
HDAC1-202ENST00000428704 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
HDAC1-202ENST00000428704 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
HDAC1-202ENST00000428704 ZNF34Q8IZ26 560 aa11.03□□□□□ -0.64
HDAC1-202ENST00000428704 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
HDAC1-202ENST00000428704 CHPF2Q9P2E5 772 aa11.03□□□□□ -0.64
HDAC1-202ENST00000428704 ZNF609O15014 1411 aa11.02□□□□□ -0.64
HDAC1-202ENST00000428704 GNAI1P63096 354 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 GRAPQ13588 217 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 DOK7Q18PE1 504 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 PARP10Q53GL7 1025 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 HDGFL1Q5TGJ6 251 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 NBPF11Q86T75 865 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.65
HDAC1-202ENST00000428704 XAGE3Q8WTP9 111 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 KCNQ5Q9NR82 932 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
HDAC1-202ENST00000428704 RBBP6Q7Z6E9 1792 aaKnown RBP11.02□□□□□ -0.65
HDAC1-202ENST00000428704 RTL9Q8NET4 1388 aa11.02□□□□□ -0.65
HDAC1-202ENST00000428704 C6orf229H3BNL8 230 aa11.01□□□□□ -0.65
HDAC1-202ENST00000428704 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
HDAC1-202ENST00000428704 CALD1Q05682 793 aaKnown RBP11.01□□□□□ -0.65
HDAC1-202ENST00000428704 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
HDAC1-202ENST00000428704 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
HDAC1-202ENST00000428704 C8orf58Q8NAV2 365 aa11.01□□□□□ -0.65
HDAC1-202ENST00000428704 NSFL1CQ9UNZ2 370 aaKnown RBP11.01□□□□□ -0.65
HDAC1-202ENST00000428704 MANSC4A6NHS7 340 aaPredicted RBP11□□□□□ -0.65
HDAC1-202ENST00000428704 VIL1P09327 827 aaKnown RBP11□□□□□ -0.65
HDAC1-202ENST00000428704 INHBEP58166 350 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 PRKG1Q13976 671 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 SLC10A5Q5PT55 438 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 SPRYD7Q5W111 196 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 ARMC9Q7Z3E5 817 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 TMC4Q7Z404 712 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 GOLGA6L2Q8N9W4 650 aaPredicted RBP11□□□□□ -0.65
HDAC1-202ENST00000428704 TSR2Q969E8 191 aaKnown RBP11□□□□□ -0.65
HDAC1-202ENST00000428704 LRCH3Q96II8 777 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 EYA3Q99504 573 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 UTP14AQ9BVJ6 771 aaKnown RBP11□□□□□ -0.65
HDAC1-202ENST00000428704 TAF1P21675 1872 aa11□□□□□ -0.65
HDAC1-202ENST00000428704 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
HDAC1-202ENST00000428704 SOX1O00570 391 aaPredicted RBP10.99□□□□□ -0.65
HDAC1-202ENST00000428704 ZNF280AP59817 542 aaPredicted RBP10.99□□□□□ -0.65
HDAC1-202ENST00000428704 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
HDAC1-202ENST00000428704 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
HDAC1-202ENST00000428704 TSPYL6Q8N831 410 aa10.99□□□□□ -0.65
HDAC1-202ENST00000428704 PRO3102Q9H379 93 aa10.99□□□□□ -0.65
HDAC1-202ENST00000428704 MYOZ2Q9NPC6 264 aa10.99□□□□□ -0.65
HDAC1-202ENST00000428704 DBF4Q9UBU7 674 aaPredicted RBP10.99□□□□□ -0.65
HDAC1-202ENST00000428704 IL16Q14005 1332 aa10.99□□□□□ -0.65
HDAC1-202ENST00000428704 COL4A1P02462 1669 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 A0A1W2PPC1 479 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC1-202ENST00000428704 ELL2O00472 640 aaPredicted RBP10.98□□□□□ -0.65
HDAC1-202ENST00000428704 HCLS1P14317 486 aaPredicted RBP10.98□□□□□ -0.65
HDAC1-202ENST00000428704 SP3Q02447 781 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 TMEM92Q6UXU6 159 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 ANKRD13DQ6ZTN6 518 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 NLRP10Q86W26 655 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 AGBL3Q8NEM8 1001 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 NR2E3Q9Y5X4 410 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 PTCH2Q9Y6C5 1203 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 LRRC37AA6NMS7 1700 aa10.98□□□□□ -0.65
HDAC1-202ENST00000428704 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 WTIPA6NIX2 430 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-202ENST00000428704 CRHR2Q13324 411 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 OTUD7BQ6GQQ9 843 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 RSBN1LQ6PCB5 846 aaPredicted RBP10.97□□□□□ -0.65
HDAC1-202ENST00000428704 PLBD2Q8NHP8 589 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 EXOC6Q8TAG9 804 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 HTATIP2Q9BUP3 242 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 PHAXQ9H814 394 aaKnown RBP10.97□□□□□ -0.65
HDAC1-202ENST00000428704 HYPKQ9NX55 129 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 POLLQ9UGP5 575 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
HDAC1-202ENST00000428704 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
HDAC1-202ENST00000428704 UNC80Q8N2C7 3258 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 CT47B1P0C2W7 299 aaPredicted RBP10.96□□□□□ -0.65
HDAC1-202ENST00000428704 USP17L8P0C7I0 530 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 PDE4AP27815 886 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 HSP90AB3PQ58FF7 597 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 DEFB123Q8N688 67 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 TMC2Q8TDI7 906 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 ISCA1Q9BUE6 129 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
HDAC1-202ENST00000428704 CRISPLD2Q9H0B8 497 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 ANGEL1Q9UNK9 670 aaKnown RBP10.96□□□□□ -0.65
HDAC1-202ENST00000428704 STXBP5LQ9Y2K9 1186 aa10.96□□□□□ -0.65
HDAC1-202ENST00000428704 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
HDAC1-202ENST00000428704 GPSM2P81274 684 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms