RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RFX7Q2KHR2 1363 aa15.16■□□□□ 0.02
TRIM39-207ENST00000428404 TTF1Q15361 905 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-207ENST00000428404 PIH1D3Q9NQM4 214 aaKnown RBP15.16■□□□□ 0.02
TRIM39-207ENST00000428404 LTBP3Q9NS15 1303 aa15.16■□□□□ 0.02
TRIM39-207ENST00000428404 NFKBIEO00221 500 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 PODNQ7Z5L7 613 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 FSD1Q9BTV5 496 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 FAM205AQ6ZU69 1335 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 SALL1Q9NSC2 1324 aa15.15■□□□□ 0.02
TRIM39-207ENST00000428404 HIP1O00291 1037 aa15.14■□□□□ 0.01
TRIM39-207ENST00000428404 AOC3Q16853 763 aa15.14■□□□□ 0.01
TRIM39-207ENST00000428404 DOK7Q18PE1 504 aa15.14■□□□□ 0.01
TRIM39-207ENST00000428404 WDR66Q8TBY9 1149 aa15.14■□□□□ 0.01
TRIM39-207ENST00000428404 GOLGB1Q14789 3259 aaKnown RBP15.14■□□□□ 0.01
TRIM39-207ENST00000428404 IGSF3O75054 1194 aa15.13■□□□□ 0.01
TRIM39-207ENST00000428404 FRAT2O75474 233 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-207ENST00000428404 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
TRIM39-207ENST00000428404 ZNF277Q9NRM2 450 aaPredicted RBP15.13■□□□□ 0.01
TRIM39-207ENST00000428404 FER1L6Q2WGJ9 1857 aa15.12■□□□□ 0.01
TRIM39-207ENST00000428404 RNF113AO15541 343 aaKnown RBP15.12■□□□□ 0.01
TRIM39-207ENST00000428404 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
TRIM39-207ENST00000428404 SEC24BO95487 1268 aa15.12■□□□□ 0.01
TRIM39-207ENST00000428404 ZFYP08048 801 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-207ENST00000428404 CHAF1AQ13111 956 aaPredicted RBP15.12■□□□□ 0.01
TRIM39-207ENST00000428404 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
TRIM39-207ENST00000428404 ARFGEF1Q9Y6D6 1849 aa15.12■□□□□ 0.01
TRIM39-207ENST00000428404 TCRBV5S4A2TA0A5A2 114 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 SGSM2O43147 1006 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 ECE2O60344 883 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 CHGBP05060 677 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 ADD2P35612 726 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 IARSP41252 1262 aaKnown RBP15.11■□□□□ 0.01
TRIM39-207ENST00000428404 NMIQ13287 307 aaPredicted RBP15.11■□□□□ 0.01
TRIM39-207ENST00000428404 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
TRIM39-207ENST00000428404 ZMYM1Q5SVZ6 1142 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 CASC1Q6TDU7 716 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.11■□□□□ 0.01
TRIM39-207ENST00000428404 DBNDD1Q9H9R9 158 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 DIAPH3Q9NSV4 1193 aa15.11■□□□□ 0.01
TRIM39-207ENST00000428404 CHD4Q14839 1912 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 YDJCA8MPS7 323 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 IDH1O75874 414 aaKnown RBP15.1■□□□□ 0.01
TRIM39-207ENST00000428404 PDE6AP16499 860 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 PRELPP51888 382 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 GTF2IP78347 998 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 UBE3CQ15386 1083 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 SLC9C2Q5TAH2 1124 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-207ENST00000428404 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
TRIM39-207ENST00000428404 LARGE2Q8N3Y3 721 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
TRIM39-207ENST00000428404 TBC1D22AQ8WUA7 517 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 IL25Q9H293 177 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 KCNQ5Q9NR82 932 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 LRP2BPQ9P2M1 347 aa15.1■□□□□ 0.01
TRIM39-207ENST00000428404 COL4A5P29400 1685 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 G3V3G9 751 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 YBX3P16989 372 aaKnown RBP eCLIP15.09■□□□□ 0.01
TRIM39-207ENST00000428404 FKBP1AP62942 108 aaKnown RBP15.09■□□□□ 0.01
TRIM39-207ENST00000428404 SLFNL1Q499Z3 407 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 DCAF8Q5TAQ9 597 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 STRIP1Q5VSL9 837 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 TTLL5Q6EMB2 1281 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 CWC27Q6UX04 472 aaKnown RBP15.09■□□□□ 0.01
TRIM39-207ENST00000428404 ZNF384Q8TF68 577 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 RUFY2Q8WXA3 655 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 HELLSQ9NRZ9 838 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 ABCF2Q9UG63 623 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 SUGT1Q9Y2Z0 365 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 AK9Q5TCS8 1911 aa15.09■□□□□ 0.01
TRIM39-207ENST00000428404 USP17L3A6NCW0 530 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 USP17L4A6NCW7 530 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 EIF5BO60841 1220 aaKnown RBP15.08■□□□□ 0
TRIM39-207ENST00000428404 PRDX5P30044 214 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 GRIK5Q16478 980 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 MFSD14BQ5SR56 506 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 DACT2Q5SW24 774 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 ERICH6Q7L0X2 663 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 CERS5Q8N5B7 392 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 APPBP2Q92624 585 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 OSBP2Q969R2 916 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 NSUN4Q96CB9 384 aaKnown RBP15.08■□□□□ 0
TRIM39-207ENST00000428404 ZNRF3Q9ULT6 936 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 RAD50Q92878 1312 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 DOCK2Q92608 1830 aa15.08■□□□□ 0
TRIM39-207ENST00000428404 LDHBP07195 334 aaKnown RBP15.07■□□□□ 0
TRIM39-207ENST00000428404 RASSF7Q02833 373 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 MECOMQ03112 1051 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 MCMDC2Q4G0Z9 681 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 ARHGAP27Q6ZUM4 889 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 NIM1KQ8IY84 436 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 MAGEB6Q8N7X4 407 aa15.07■□□□□ 0
TRIM39-207ENST00000428404 SEC62Q99442 399 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms