RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 LAMB1P07942 1786 aa10.54□□□□□ -0.72
ITSN1-216ENST00000428240 SPEF2Q9C093 1822 aa10.54□□□□□ -0.72
ITSN1-216ENST00000428240 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 UNCXA6NJT0 531 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 ITGA6P23229 1130 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 IGHMBP2P38935 993 aaKnown RBP10.53□□□□□ -0.72
ITSN1-216ENST00000428240 IREB2P48200 963 aaKnown RBP10.53□□□□□ -0.72
ITSN1-216ENST00000428240 SLC4A8Q2Y0W8 1093 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 SUPT20HL1Q3ZLR7 823 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 CFAP100Q494V2 611 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 ANKRD13AQ8IZ07 590 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 CNKSR2Q8WXI2 1034 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 MS4A4AQ96JQ5 239 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 VEZTQ9HBM0 779 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 IRS2Q9Y4H2 1338 aa10.53□□□□□ -0.72
ITSN1-216ENST00000428240 RANBP2P49792 3224 aaKnown RBP10.52□□□□□ -0.72
ITSN1-216ENST00000428240 SPDYE2BA6NHP3 402 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 DDX58O95786 925 aaKnown RBP10.52□□□□□ -0.73
ITSN1-216ENST00000428240 SPDYE6P0CI01 402 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 RASA3Q14644 834 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 RALBP1Q15311 655 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 KSR2Q6VAB6 950 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 UBE3BQ7Z3V4 1068 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 SH3TC2Q8TF17 1288 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 ANKRD2Q9GZV1 360 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 ELP3Q9H9T3 547 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 IFT57Q9NWB7 429 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 JAG2Q9Y219 1238 aa10.52□□□□□ -0.73
ITSN1-216ENST00000428240 NEURL1BA8MQ27 555 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 H7C1W4 665 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 MYO1BO43795 1136 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 TAF5LO75529 589 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 KCNJ4P48050 445 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 CHRNDQ07001 517 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 TSPYL6Q8N831 410 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 BRI3BPQ8WY22 251 aa10.51□□□□□ -0.73
ITSN1-216ENST00000428240 CCL15-CCL14A0A0B4J2E2 113 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 RBM5P52756 815 aaKnown RBP eCLIP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 WDR43Q15061 677 aaKnown RBP eCLIP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 TAF1CQ15572 869 aaPredicted RBP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 CCL15Q16663 113 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 CCDC30Q5VVM6 783 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 FAM43AQ8N2R8 423 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 HELBQ8NG08 1087 aaPredicted RBP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 MPHOSPH8Q99549 860 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 ARHGAP39Q9C0H5 1083 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 ZFYVE28Q9HCC9 887 aa10.5□□□□□ -0.73
ITSN1-216ENST00000428240 RBM27Q9P2N5 1060 aaKnown RBP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 KIAA0100Q14667 2235 aaKnown RBP10.5□□□□□ -0.73
ITSN1-216ENST00000428240 CSF1RP07333 972 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 IL1R1P14778 569 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 CASP7P55210 303 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 GNAI1P63096 354 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 NEXNQ0ZGT2 675 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 SHISA4Q96DD7 197 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 TEPSINQ96N21 525 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 PLA2G12BQ9BX93 195 aa10.49□□□□□ -0.73
ITSN1-216ENST00000428240 MYBBP1AQ9BQG0 1328 aaKnown RBP10.49□□□□□ -0.73
ITSN1-216ENST00000428240 OTOFQ9HC10 1997 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 ECM2O94769 699 aaPredicted RBP10.48□□□□□ -0.73
ITSN1-216ENST00000428240 GTF2A2P52657 109 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 FKBP1AP62942 108 aaKnown RBP10.48□□□□□ -0.73
ITSN1-216ENST00000428240 VGLL4Q14135 290 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 ARHGEF6Q15052 776 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 MTFR1Q15390 333 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 C15orf52Q6ZUT6 534 aaKnown RBP10.48□□□□□ -0.73
ITSN1-216ENST00000428240 G2E3Q7L622 706 aa10.48□□□□□ -0.73
ITSN1-216ENST00000428240 TDRD3Q9H7E2 651 aaKnown RBP10.48□□□□□ -0.73
ITSN1-216ENST00000428240 ZNF70Q9UC06 446 aaPredicted RBP10.48□□□□□ -0.73
ITSN1-216ENST00000428240 ZSWIM8A7E2V4 1837 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 ECM29Q5VYK3 1845 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 MYH3P11055 1940 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 DLL1O00548 723 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 APAF1O14727 1248 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 LACTBP83111 547 aaPredicted RBP10.47□□□□□ -0.73
ITSN1-216ENST00000428240 GCKRQ14397 625 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 ZNF804AQ7Z570 1209 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.47□□□□□ -0.73
ITSN1-216ENST00000428240 TMEM39BQ9GZU3 492 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 COL6A3P12111 3177 aa10.47□□□□□ -0.73
ITSN1-216ENST00000428240 LAMA3Q16787 3333 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 ANKRD18BA2A2Z9 1011 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 TCP10L2B9ZVM9 353 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 TLR2O60603 784 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 CTGFP29279 349 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 MAP3K9P80192 1104 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 TNFAIP1Q13829 316 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 DPF3Q92784 378 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 PRO3102Q9H379 93 aa10.46□□□□□ -0.73
ITSN1-216ENST00000428240 BTBD19C9JJ37 291 aa10.45□□□□□ -0.74
ITSN1-216ENST00000428240 PLIN1O60240 522 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms