RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 NBR1Q14596 966 aa17.22■□□□□ 0.35
CDK3-201ENST00000425876 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
CDK3-201ENST00000425876 LIMCH1Q9UPQ0 1083 aa17.22■□□□□ 0.35
CDK3-201ENST00000425876 IDH1O75874 414 aaKnown RBP17.21■□□□□ 0.35
CDK3-201ENST00000425876 PDE6AP16499 860 aa17.21■□□□□ 0.35
CDK3-201ENST00000425876 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
CDK3-201ENST00000425876 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
CDK3-201ENST00000425876 PDRG1Q9NUG6 133 aa17.21■□□□□ 0.35
CDK3-201ENST00000425876 CTNNA3Q9UI47 895 aa17.21■□□□□ 0.35
CDK3-201ENST00000425876 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.35
CDK3-201ENST00000425876 DOCK2Q92608 1830 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 TCRBV5S4A2TA0A5A2 114 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 CYP21A2P08686 494 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 AK2P54819 239 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 BLOC1S2Q6QNY1 142 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
CDK3-201ENST00000425876 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
CDK3-201ENST00000425876 PUS7LQ9H0K6 701 aaKnown RBP17.2■□□□□ 0.34
CDK3-201ENST00000425876 STK32BQ9NY57 414 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 QSER1Q2KHR3 1735 aa17.2■□□□□ 0.34
CDK3-201ENST00000425876 GPAA1O43292 621 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 RAB3GAP1Q15042 981 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
CDK3-201ENST00000425876 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
CDK3-201ENST00000425876 PDGFDQ9GZP0 370 aaPredicted RBP17.19■□□□□ 0.34
CDK3-201ENST00000425876 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 DENND2AQ9ULE3 1009 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 LEMD3Q9Y2U8 911 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 HMGB1P09429 215 aaKnown RBP17.19■□□□□ 0.34
CDK3-201ENST00000425876 GYG1P46976 350 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 NUCB2P80303 420 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 ANKRD1Q15327 319 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 NEK1Q96PY6 1258 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
CDK3-201ENST00000425876 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
CDK3-201ENST00000425876 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 NRXN2Q9P2S2 1712 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 FOXP2O15409 715 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 BBOX1O75936 387 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 C15orf52Q6ZUT6 534 aaKnown RBP17.18■□□□□ 0.34
CDK3-201ENST00000425876 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 TAF6LQ9Y6J9 622 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
CDK3-201ENST00000425876 IGSF3O75054 1194 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 CPA1P15085 419 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
CDK3-201ENST00000425876 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
CDK3-201ENST00000425876 TMC4Q7Z404 712 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 BRIP1Q9BX63 1249 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 XDHP47989 1333 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 PNPLA7Q6ZV29 1317 aa17.17■□□□□ 0.34
CDK3-201ENST00000425876 FRAT2O75474 233 aaPredicted RBP17.16■□□□□ 0.34
CDK3-201ENST00000425876 ZGPATQ8N5A5 531 aaKnown RBP17.16■□□□□ 0.34
CDK3-201ENST00000425876 WTIPA6NIX2 430 aaPredicted RBP17.15■□□□□ 0.34
CDK3-201ENST00000425876 FGAP02671 866 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 ALX1Q15699 326 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 IMMTQ16891 758 aaKnown RBP17.15■□□□□ 0.34
CDK3-201ENST00000425876 MAGEB6Q8N7X4 407 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 LRP2BPQ9P2M1 347 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 ZMYM6O95789 1325 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 MYO5AQ9Y4I1 1855 aaKnown RBP17.15■□□□□ 0.34
CDK3-201ENST00000425876 CLEC17AQ6ZS10 378 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
CDK3-201ENST00000425876 AIDAQ96BJ3 306 aa17.15■□□□□ 0.34
CDK3-201ENST00000425876 STRBPQ96SI9 672 aaKnown RBP17.15■□□□□ 0.34
CDK3-201ENST00000425876 COL1A1P02452 1464 aaPredicted RBP17.14■□□□□ 0.34
CDK3-201ENST00000425876 TNPO1Q92973 898 aaKnown RBP17.14■□□□□ 0.33
CDK3-201ENST00000425876 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
CDK3-201ENST00000425876 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
CDK3-201ENST00000425876 PARP3Q9Y6F1 533 aa17.14■□□□□ 0.33
CDK3-201ENST00000425876 E7EWF7 191 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 GNAT2P19087 354 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 ATP2B4P23634 1241 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 KLRK1P26718 216 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 STOX1Q6ZVD7 989 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
CDK3-201ENST00000425876 PODXL2Q9NZ53 605 aa17.13■□□□□ 0.33
CDK3-201ENST00000425876 PATL2C9JE40 543 aaKnown RBP17.12■□□□□ 0.33
CDK3-201ENST00000425876 MMP10P09238 476 aa17.12■□□□□ 0.33
CDK3-201ENST00000425876 MCM4P33991 863 aa17.12■□□□□ 0.33
CDK3-201ENST00000425876 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
CDK3-201ENST00000425876 FBXL16Q8N461 479 aa17.12■□□□□ 0.33
CDK3-201ENST00000425876 GBP4Q96PP9 640 aa17.12■□□□□ 0.33
CDK3-201ENST00000425876 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
CDK3-201ENST00000425876 PDE6BP35913 854 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 EXOSC10Q01780 885 aaKnown RBP17.11■□□□□ 0.33
CDK3-201ENST00000425876 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
CDK3-201ENST00000425876 TTLL5Q6EMB2 1281 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 ZNF213O14771 459 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 MBD4O95243 580 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 SRGNP10124 158 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 NPR1P16066 1061 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 GPSM2P81274 684 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
CDK3-201ENST00000425876 TPCN1Q9ULQ1 816 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms