RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
COL12A1-205ENST00000425443 PLA2G4DQ86XP0 818 aa15.21■□□□□ 0.02
COL12A1-205ENST00000425443 ATG3Q9NT62 314 aa15.21■□□□□ 0.02
COL12A1-205ENST00000425443 HSPD1P10809 573 aaKnown RBP15.2■□□□□ 0.02
COL12A1-205ENST00000425443 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
COL12A1-205ENST00000425443 TTLL5Q6EMB2 1281 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 ISCA1Q9BUE6 129 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 TRIM5Q9C035 493 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 LAMB4A4D0S4 1761 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 CTDNEP1O95476 244 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 ARID5BQ14865 1188 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 METTL24Q5JXM2 366 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 ZMYM1Q5SVZ6 1142 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
COL12A1-205ENST00000425443 ZNF75DP51815 510 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 LDHAL6AQ6ZMR3 332 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
COL12A1-205ENST00000425443 GOLPH3LQ9H4A5 285 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 CNNM1Q9NRU3 951 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 PALLDQ8WX93 1383 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 CLGNO14967 610 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 ADORA1P30542 326 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 EP400NLQ6ZTU2 488 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 GPHNQ9NQX3 736 aaPredicted RBP15.19■□□□□ 0.02
COL12A1-205ENST00000425443 MAST3O60307 1309 aa15.19■□□□□ 0.02
COL12A1-205ENST00000425443 PCCAP05165 728 aaPredicted RBP15.18■□□□□ 0.02
COL12A1-205ENST00000425443 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 ZSCAN25Q6NSZ9 544 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 ZBTB38Q8NAP3 1195 aaPredicted RBP15.18■□□□□ 0.02
COL12A1-205ENST00000425443 E7EWF7 191 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 KIF20AO95235 890 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 ZNF165P49910 485 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 MTERF4Q7Z6M4 381 aaKnown RBP15.18■□□□□ 0.02
COL12A1-205ENST00000425443 SYNE4Q8N205 404 aa15.18■□□□□ 0.02
COL12A1-205ENST00000425443 C16orf45Q96MC5 204 aaPredicted RBP15.18■□□□□ 0.02
COL12A1-205ENST00000425443 NAA30Q147X3 362 aaPredicted RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 TDRD7Q8NHU6 1098 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 CACTINQ8WUQ7 758 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 TRMT112Q9UI30 125 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 KCPQ6ZWJ8 1503 aa15.17■□□□□ 0.02
COL12A1-205ENST00000425443 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
COL12A1-205ENST00000425443 M0R2C6 588 aa15.17■□□□□ 0.02
COL12A1-205ENST00000425443 IMMTQ16891 758 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
COL12A1-205ENST00000425443 PTPDC1A2A3K4 754 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 ZAP70P43403 619 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 HLFQ16534 295 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 GIGYF2Q6Y7W6 1299 aaKnown RBP15.16■□□□□ 0.02
COL12A1-205ENST00000425443 OSBP2Q969R2 916 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 CFAP45Q9UL16 551 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 MYH15Q9Y2K3 1946 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 MAP3K15Q6ZN16 1313 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 ITGA6P23229 1130 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 IQCB1Q15051 598 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
COL12A1-205ENST00000425443 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
COL12A1-205ENST00000425443 EXOC5O00471 708 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 ZFYP08048 801 aaPredicted RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 ZSCAN16Q9H4T2 348 aaPredicted RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 USP27XA6NNY8 438 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 PFKFB2O60825 505 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 ME1P48163 572 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 SNW1Q13573 536 aaKnown RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 CTIFO43310 598 aaKnown RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 IRX5P78411 483 aaPredicted RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 RALYLQ86SE5 291 aaKnown RBP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL12A1-205ENST00000425443 GJB4Q9NTQ9 266 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
COL12A1-205ENST00000425443 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
COL12A1-205ENST00000425443 POLR3DP05423 398 aaPredicted RBP15.14■□□□□ 0.01
COL12A1-205ENST00000425443 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL12A1-205ENST00000425443 LLPHQ9BRT6 129 aaKnown RBP15.14■□□□□ 0.01
COL12A1-205ENST00000425443 GREM2Q9H772 168 aa15.14■□□□□ 0.01
COL12A1-205ENST00000425443 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
COL12A1-205ENST00000425443 SCARF1Q14162 830 aa15.14■□□□□ 0.01
COL12A1-205ENST00000425443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.14■□□□□ 0.01
COL12A1-205ENST00000425443 ANKRD7Q92527 254 aa15.14■□□□□ 0.01
COL12A1-205ENST00000425443 ZNF592Q92610 1267 aa15.14■□□□□ 0.01
COL12A1-205ENST00000425443 GLI3P10071 1580 aa15.13■□□□□ 0.01
COL12A1-205ENST00000425443 TPM3P06753 285 aa15.13■□□□□ 0.01
COL12A1-205ENST00000425443 NLRP10Q86W26 655 aa15.13■□□□□ 0.01
COL12A1-205ENST00000425443 CCAR1Q8IX12 1150 aaKnown RBP15.13■□□□□ 0.01
COL12A1-205ENST00000425443 IDH1O75874 414 aaKnown RBP15.13■□□□□ 0.01
COL12A1-205ENST00000425443 ZBTB1Q9Y2K1 713 aa15.13■□□□□ 0.01
COL12A1-205ENST00000425443 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
COL12A1-205ENST00000425443 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
COL12A1-205ENST00000425443 TICAM2Q86XR7 235 aa15.12■□□□□ 0.01
COL12A1-205ENST00000425443 XIRP1Q702N8 1843 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms