RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 DLGAP5Q15398 846 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 NECAB2Q7Z6G3 386 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 FAM43AQ8N2R8 423 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 PNISRQ8TF01 805 aaKnown RBP8.34□□□□□ -1.07
SDCBP-203ENST00000424270 BRI3BPQ8WY22 251 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
SDCBP-203ENST00000424270 PHACTR3Q96KR7 559 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 GUCD1Q96NT3 240 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 DEFB118Q96PH6 123 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 SRRDQ9UH36 339 aa8.34□□□□□ -1.07
SDCBP-203ENST00000424270 COL1A1P02452 1464 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-203ENST00000424270 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 UNC80Q8N2C7 3258 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 CLRN2A0PK11 232 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
SDCBP-203ENST00000424270 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 TLR2O60603 784 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 NEFMP07197 916 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 TAF1P21675 1872 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 OSBPP22059 807 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 MAP3K12Q12852 859 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 CC2D1BQ5T0F9 858 aaKnown RBP8.33□□□□□ -1.08
SDCBP-203ENST00000424270 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 CPA4Q9UI42 421 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 PPP2R3BQ9Y5P8 575 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 CSADQ9Y600 493 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 LAMB2P55268 1798 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 ANKRD36CQ5JPF3 1778 aa8.33□□□□□ -1.08
SDCBP-203ENST00000424270 ANXA1P04083 346 aa8.32□□□□□ -1.08
SDCBP-203ENST00000424270 RBM5P52756 815 aaKnown RBP eCLIP8.32□□□□□ -1.08
SDCBP-203ENST00000424270 NBPF12Q5TAG4 269 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-203ENST00000424270 SLAIN1Q8ND83 568 aa8.32□□□□□ -1.08
SDCBP-203ENST00000424270 IL27Q8NEV9 243 aa8.32□□□□□ -1.08
SDCBP-203ENST00000424270 HELBQ8NG08 1087 aaPredicted RBP8.32□□□□□ -1.08
SDCBP-203ENST00000424270 PODXL2Q9NZ53 605 aa8.32□□□□□ -1.08
SDCBP-203ENST00000424270 SCN9AQ15858 1988 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 XDHP47989 1333 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 CETPP11597 493 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 FOSL2P15408 326 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 FCGRTP55899 365 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 TJAP1Q5JTD0 557 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 DACT2Q5SW24 774 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 COPS6Q7L5N1 327 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 CFAP53Q96M91 514 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 CCDC85AQ96PX6 553 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-203ENST00000424270 CDX2Q99626 313 aaPredicted RBP8.31□□□□□ -1.08
SDCBP-203ENST00000424270 SSUH2Q9Y2M2 353 aa8.31□□□□□ -1.08
SDCBP-203ENST00000424270 F8W031 263 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 IRS4O14654 1257 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 ADCY3O60266 1144 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 USP2O75604 605 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 U2AF1L5P0DN76 240 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 MMP14P50281 582 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 EIF4A1P60842 406 aaKnown RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 MDM2Q00987 491 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 U2AF1Q01081 240 aaKnown RBP eCLIP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 PRKCZQ05513 592 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 SF3B3Q15393 1217 aaKnown RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 STRIP1Q5VSL9 837 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 TTLL5Q6EMB2 1281 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 FAM109BQ6ICB4 259 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 XAGE3Q8WTP9 111 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 LBHD1Q9BQE6 289 aaPredicted RBP8.3□□□□□ -1.08
SDCBP-203ENST00000424270 NUDCQ9Y266 331 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 HCN4Q9Y3Q4 1203 aa8.3□□□□□ -1.08
SDCBP-203ENST00000424270 FAM205AQ6ZU69 1335 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 ZNF646O15015 1829 aaPredicted RBP8.29□□□□□ -1.08
SDCBP-203ENST00000424270 ATP5J2-PTCD1G3V325 749 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 HTATSF1O43719 755 aaKnown RBP8.29□□□□□ -1.08
SDCBP-203ENST00000424270 INHAP05111 366 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 HSP90B1P14625 803 aaKnown RBP8.29□□□□□ -1.08
SDCBP-203ENST00000424270 ELNP15502 786 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 CAPN2P17655 700 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 GTF2IP78347 998 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 SNAPC2Q13487 334 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 VGLL4Q14135 290 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 CCDC152Q4G0S7 254 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 ANKRD18AQ8IVF6 992 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 DIS3LQ8TF46 1054 aaKnown RBP8.29□□□□□ -1.08
SDCBP-203ENST00000424270 MYLIPQ8WY64 445 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 NBPF3Q9H094 633 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 SSC5DA1L4H1 1573 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 ZSWIM8A7E2V4 1837 aa8.29□□□□□ -1.08
SDCBP-203ENST00000424270 BTBD19C9JJ37 291 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 POTEB2H3BUK9 544 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 TNFAIP1Q13829 316 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 RASA3Q14644 834 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 PROSER3Q2NL68 480 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 SPDYE1Q8NFV5 336 aaPredicted RBP8.28□□□□□ -1.08
SDCBP-203ENST00000424270 COA1Q9GZY4 146 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 C11orf49Q9H6J7 331 aa8.28□□□□□ -1.08
SDCBP-203ENST00000424270 ZNF804BA4D1E1 1349 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms