RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 STRCQ7RTU9 1775 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 MINDY4BA8MYZ0 360 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 PDE8BO95263 885 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 RBM10P98175 930 aaKnown RBP14.05□□□□□ -0.16
PTPRN-204ENST00000423636 RASGRF1Q13972 1273 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 ANKRD1Q15327 319 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 AMIGO3Q86WK7 504 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 GPR101Q96P66 508 aaPredicted RBP14.05□□□□□ -0.16
PTPRN-204ENST00000423636 ATP6V1DQ9Y5K8 247 aa14.05□□□□□ -0.16
PTPRN-204ENST00000423636 KLRK1P26718 216 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 PTPN21Q16825 1174 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 AKAP2Q9Y2D5 859 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 BIN1O00499 593 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 MBD4O95243 580 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 CLCN1P35523 988 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 ME1P48163 572 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 IMMTQ16891 758 aaKnown RBP14.04□□□□□ -0.16
PTPRN-204ENST00000423636 DNTTIP2Q5QJE6 756 aaKnown RBP14.04□□□□□ -0.16
PTPRN-204ENST00000423636 NFXL1Q6ZNB6 911 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 AIDAQ96BJ3 306 aa14.04□□□□□ -0.16
PTPRN-204ENST00000423636 CPLX1O14810 134 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 CSF1RP07333 972 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 MARCKSP29966 332 aaPredicted RBP14.03□□□□□ -0.16
PTPRN-204ENST00000423636 KRT32Q14532 448 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 TNMDQ9H2S6 317 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 HELLSQ9NRZ9 838 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 N4BP2Q86UW6 1770 aaPredicted RBP14.03□□□□□ -0.16
PTPRN-204ENST00000423636 ANTXR2P58335 489 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 ERFEQ4G0M1 354 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 ZSCAN30Q86W11 494 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 PPP1R9BQ96SB3 815 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 A0A1B0GVL5 298 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 PDE8AO60658 829 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 SPECC1Q5M775 1068 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 NBPF3Q9H094 633 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 LRP2BPQ9P2M1 347 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 CRYBG1Q9Y4K1 1723 aa14.03□□□□□ -0.16
PTPRN-204ENST00000423636 FDPSP14324 419 aaKnown RBP14.02□□□□□ -0.16
PTPRN-204ENST00000423636 PDE6AP16499 860 aa14.02□□□□□ -0.16
PTPRN-204ENST00000423636 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.16
PTPRN-204ENST00000423636 ANO6Q4KMQ2 910 aa14.02□□□□□ -0.16
PTPRN-204ENST00000423636 NUP62CLQ9H1M0 184 aa14.02□□□□□ -0.16
PTPRN-204ENST00000423636 CCDC87Q9NVE4 849 aa14.02□□□□□ -0.16
PTPRN-204ENST00000423636 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.16
PTPRN-204ENST00000423636 TACC3Q9Y6A5 838 aa14.02□□□□□ -0.17
PTPRN-204ENST00000423636 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.02□□□□□ -0.17
PTPRN-204ENST00000423636 MRC1P22897 1456 aa14.02□□□□□ -0.17
PTPRN-204ENST00000423636 IL17RAQ96F46 866 aa14.02□□□□□ -0.17
PTPRN-204ENST00000423636 GLI3P10071 1580 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 EXOSC10Q01780 885 aaKnown RBP14.01□□□□□ -0.17
PTPRN-204ENST00000423636 DRC7Q8IY82 874 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 APPBP2Q92624 585 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 GOLPH3LQ9H4A5 285 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 ORC3Q9UBD5 711 aaPredicted RBP14.01□□□□□ -0.17
PTPRN-204ENST00000423636 CLIC4Q9Y696 253 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 BCL9O00512 1426 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 RESTQ13127 1097 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 HSP90AA4PQ58FG1 418 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 ADGRA1Q86SQ6 560 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 LCORLQ8N3X6 602 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
PTPRN-204ENST00000423636 TEX13AQ9BXU3 409 aaPredicted RBP14.01□□□□□ -0.17
PTPRN-204ENST00000423636 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 NEDD4P46934 1319 aa14.01□□□□□ -0.17
PTPRN-204ENST00000423636 CIAO1O76071 339 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 PDCP20941 246 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 RAI14Q9P0K7 980 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 TOGARAM1Q9Y4F4 1720 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 SPATA5Q8NB90 893 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 DSCC1Q9BVC3 393 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 RIC1Q4ADV7 1423 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 KIF28PB7ZC32 967 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 DYNLL1P63167 89 aaKnown RBP14□□□□□ -0.17
PTPRN-204ENST00000423636 CHRNDQ07001 517 aa14□□□□□ -0.17
PTPRN-204ENST00000423636 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
PTPRN-204ENST00000423636 CELF1Q92879 486 aaKnown RBP14□□□□□ -0.17
PTPRN-204ENST00000423636 MYO5AQ9Y4I1 1855 aaKnown RBP13.99□□□□□ -0.17
PTPRN-204ENST00000423636 ADAMTS7Q9UKP4 1686 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 PFKFB2O60825 505 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 CDC27P30260 824 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 TDO2P48775 406 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 EIF5P55010 431 aaKnown RBP13.99□□□□□ -0.17
PTPRN-204ENST00000423636 ILDR1Q86SU0 546 aaPredicted RBP13.99□□□□□ -0.17
PTPRN-204ENST00000423636 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 LINC00116Q8NCU8 138 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
PTPRN-204ENST00000423636 TAF1P21675 1872 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 ADD2P35612 726 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 TYRO3Q06418 890 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 TRDNQ13061 729 aa13.99□□□□□ -0.17
PTPRN-204ENST00000423636 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
PTPRN-204ENST00000423636 EPB41L2O43491 1005 aaKnown RBP13.98□□□□□ -0.17
PTPRN-204ENST00000423636 MAP3K11Q16584 847 aa13.98□□□□□ -0.17
PTPRN-204ENST00000423636 VGLL2Q8N8G2 317 aa13.98□□□□□ -0.17
PTPRN-204ENST00000423636 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
PTPRN-204ENST00000423636 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms