RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MROH2AA6NES4 1674 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 FKBP5Q13451 457 aaPredicted RBP8.85□□□□□ -0.99
LINC00458-201ENST00000423442 COX20Q5RI15 118 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 DZIP1LQ8IYY4 767 aaKnown RBP8.85□□□□□ -0.99
LINC00458-201ENST00000423442 IL22RA1Q8N6P7 574 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 KIDINS220Q9ULH0 1771 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 CLIP1P30622 1438 aa8.85□□□□□ -0.99
LINC00458-201ENST00000423442 PLA2R1Q13018 1463 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 TCOF1Q13428 1488 aaKnown RBP8.84□□□□□ -0.99
LINC00458-201ENST00000423442 TOM1O60784 492 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 PSAPP07602 524 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 TROQ12816 1431 aaPredicted RBP8.84□□□□□ -0.99
LINC00458-201ENST00000423442 CFAP70Q5T0N1 1121 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 KRTAP9-9Q9BYP9 154 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 KRTAP9-4Q9BYQ2 154 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 ITSN2Q9NZM3 1697 aa8.84□□□□□ -0.99
LINC00458-201ENST00000423442 MYO3AQ8NEV4 1616 aa8.83□□□□□ -1
LINC00458-201ENST00000423442 LOC105371045A0A1W2PR82 267 aa8.83□□□□□ -1
LINC00458-201ENST00000423442 A6NJR5 290 aa8.83□□□□□ -1
LINC00458-201ENST00000423442 PRIMPOLQ96LW4 560 aa8.83□□□□□ -1
LINC00458-201ENST00000423442 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00458-201ENST00000423442 ZNF142P52746 1687 aaPredicted RBP8.83□□□□□ -1
LINC00458-201ENST00000423442 CLTCQ00610 1675 aaKnown RBP8.83□□□□□ -1
LINC00458-201ENST00000423442 ABCC1P33527 1531 aa8.83□□□□□ -1
LINC00458-201ENST00000423442 CEP170BQ9Y4F5 1589 aaPredicted RBP8.82□□□□□ -1
LINC00458-201ENST00000423442 F8W735 103 aaPredicted RBP8.82□□□□□ -1
LINC00458-201ENST00000423442 GHRHP01286 108 aa8.82□□□□□ -1
LINC00458-201ENST00000423442 SETDB1Q15047 1291 aa8.82□□□□□ -1
LINC00458-201ENST00000423442 ETFBKMTQ8IXQ9 262 aa8.82□□□□□ -1
LINC00458-201ENST00000423442 MRPL18Q9H0U6 180 aaKnown RBP8.82□□□□□ -1
LINC00458-201ENST00000423442 TRIM33Q9UPN9 1127 aa8.82□□□□□ -1
LINC00458-201ENST00000423442 PREX2Q70Z35 1606 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 LRRIQ1Q96JM4 1722 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 BTBD11A6QL63 1104 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 FSTP19883 344 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 RFX1P22670 979 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
LINC00458-201ENST00000423442 FAM26DQ5JW98 314 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 AGGF1Q8N302 714 aaeCLIP8.81□□□□□ -1
LINC00458-201ENST00000423442 TMEM130Q8N3G9 435 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 SAP130Q9H0E3 1048 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 GOLGA2P5Q9HBQ8 144 aa8.81□□□□□ -1
LINC00458-201ENST00000423442 PTPRKQ15262 1439 aa8.8□□□□□ -1
LINC00458-201ENST00000423442 CASKIN1Q8WXD9 1431 aa8.8□□□□□ -1
LINC00458-201ENST00000423442 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
LINC00458-201ENST00000423442 SAMD9LQ8IVG5 1584 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 CCDC18Q5T9S5 1454 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 PRMT3O60678 531 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 HOXD8P13378 290 aaPredicted RBP8.79□□□□□ -1
LINC00458-201ENST00000423442 SOX18P35713 384 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 RBSNQ9H1K0 784 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 CPS1P31327 1500 aa8.79□□□□□ -1
LINC00458-201ENST00000423442 SHANK2Q9UPX8 1470 aa8.78□□□□□ -1
LINC00458-201ENST00000423442 SSTR4P31391 388 aa8.78□□□□□ -1
LINC00458-201ENST00000423442 GGT6Q6P531 493 aa8.78□□□□□ -1
LINC00458-201ENST00000423442 NLRP13Q86W25 1043 aa8.78□□□□□ -1
LINC00458-201ENST00000423442 PCMTD2Q9NV79 361 aa8.78□□□□□ -1
LINC00458-201ENST00000423442 ZNF777Q9ULD5 760 aaPredicted RBP8.78□□□□□ -1
LINC00458-201ENST00000423442 DNMT1P26358 1616 aaKnown RBP8.78□□□□□ -1
LINC00458-201ENST00000423442 POLR1AO95602 1720 aaPredicted RBP8.77□□□□□ -1
LINC00458-201ENST00000423442 CDC42BPAQ5VT25 1732 aa8.77□□□□□ -1
LINC00458-201ENST00000423442 ALKQ9UM73 1620 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 GLB1P16278 677 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 COL13A1Q5TAT6 717 aaPredicted RBP8.77□□□□□ -1.01
LINC00458-201ENST00000423442 Q6ZS46 218 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 GALNT11Q8NCW6 608 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 NEURL4Q96JN8 1562 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 SPAG9O60271 1321 aaKnown RBP8.77□□□□□ -1.01
LINC00458-201ENST00000423442 A2ML1A8K2U0 1454 aa8.77□□□□□ -1.01
LINC00458-201ENST00000423442 HNRNPMP52272 730 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC00458-201ENST00000423442 OCLNQ16625 522 aa8.76□□□□□ -1.01
LINC00458-201ENST00000423442 CAPN12Q6ZSI9 719 aa8.76□□□□□ -1.01
LINC00458-201ENST00000423442 SRA1Q9HD15 236 aaKnown RBP8.76□□□□□ -1.01
LINC00458-201ENST00000423442 RGS17Q9UGC6 210 aaPredicted RBP8.76□□□□□ -1.01
LINC00458-201ENST00000423442 PPME1Q9Y570 386 aa8.76□□□□□ -1.01
LINC00458-201ENST00000423442 FYCO1Q9BQS8 1478 aa8.76□□□□□ -1.01
LINC00458-201ENST00000423442 MTUS2Q5JR59 1369 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 CEP162Q5TB80 1403 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 LINC01387J3KSC0 135 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
LINC00458-201ENST00000423442 ATP11AP98196 1134 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 MCTP1Q6DN14 999 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 C16orf46Q6P387 395 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 TXNDC11Q6PKC3 985 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.75□□□□□ -1.01
LINC00458-201ENST00000423442 MAP4K3Q8IVH8 894 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 UBL7Q96S82 380 aaPredicted RBP8.75□□□□□ -1.01
LINC00458-201ENST00000423442 ZMIZ1Q9ULJ6 1067 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 A2MP01023 1474 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
LINC00458-201ENST00000423442 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 SYCP2Q9BX26 1530 aa8.75□□□□□ -1.01
LINC00458-201ENST00000423442 PLXNC1O60486 1568 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 VWDEQ8N2E2 1590 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 WISP1O95388 367 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 SWI5Q1ZZU3 235 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 OR13H1Q8NG92 308 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms