RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 SLC10A5Q5PT55 438 aa27.35■■□□□ 1.97
LSM8-203ENST00000422760 LRRC4BQ9NT99 713 aa27.35■■□□□ 1.97
LSM8-203ENST00000422760 LAMA4Q16363 1823 aa27.35■■□□□ 1.97
LSM8-203ENST00000422760 UBR3Q6ZT12 1888 aa27.34■■□□□ 1.97
LSM8-203ENST00000422760 WASHC4Q2M389 1173 aa27.34■■□□□ 1.97
LSM8-203ENST00000422760 NBPF5PQ86XG9 351 aaPredicted RBP27.34■■□□□ 1.97
LSM8-203ENST00000422760 APPBP2Q92624 585 aa27.34■■□□□ 1.97
LSM8-203ENST00000422760 RBM27Q9P2N5 1060 aaKnown RBP27.34■■□□□ 1.97
LSM8-203ENST00000422760 DOCK2Q92608 1830 aa27.34■■□□□ 1.97
LSM8-203ENST00000422760 TTF1Q15361 905 aaPredicted RBP27.33■■□□□ 1.97
LSM8-203ENST00000422760 FAM196AQ6ZSG2 479 aa27.33■■□□□ 1.97
LSM8-203ENST00000422760 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.33■■□□□ 1.97
LSM8-203ENST00000422760 TSPY26PQ9H489 355 aa27.33■■□□□ 1.97
LSM8-203ENST00000422760 SYCE3A1L190 88 aa27.33■■□□□ 1.97
LSM8-203ENST00000422760 ANKRD18AQ8IVF6 992 aa27.33■■□□□ 1.97
LSM8-203ENST00000422760 MSNP26038 577 aaKnown RBP27.32■■□□□ 1.96
LSM8-203ENST00000422760 TCEANC2Q96MN5 208 aa27.32■■□□□ 1.96
LSM8-203ENST00000422760 PIH1D3Q9NQM4 214 aaKnown RBP27.32■■□□□ 1.96
LSM8-203ENST00000422760 RFC4P35249 363 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 UVSSAQ2YD98 709 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 KRT27Q7Z3Y8 459 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 NEK1Q96PY6 1258 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 SYT1P21579 422 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 UBE2HP62256 183 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 TRAPPC3LQ5T215 181 aa27.31■■□□□ 1.96
LSM8-203ENST00000422760 FOXD4L5Q5VV16 416 aaPredicted RBP27.31■■□□□ 1.96
LSM8-203ENST00000422760 FOXD4L4Q8WXT5 416 aaPredicted RBP27.31■■□□□ 1.96
LSM8-203ENST00000422760 F13A1P00488 732 aa27.3■■□□□ 1.96
LSM8-203ENST00000422760 ADD2P35612 726 aa27.3■■□□□ 1.96
LSM8-203ENST00000422760 RASGRF1Q13972 1273 aa27.3■■□□□ 1.96
LSM8-203ENST00000422760 USP48Q86UV5 1035 aa27.3■■□□□ 1.96
LSM8-203ENST00000422760 PUS7LQ9H0K6 701 aaKnown RBP27.3■■□□□ 1.96
LSM8-203ENST00000422760 TNRC6CQ9HCJ0 1690 aaKnown RBP27.3■■□□□ 1.96
LSM8-203ENST00000422760 PDCP20941 246 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 ME3Q16798 604 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 CCDC183Q5T5S1 534 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 ZSCAN25Q6NSZ9 544 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 SPATA5Q8NB90 893 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 TPCN1Q9ULQ1 816 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 IDH1O75874 414 aaKnown RBP27.29■■□□□ 1.96
LSM8-203ENST00000422760 TPTE2Q6XPS3 522 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 STOX1Q6ZVD7 989 aa27.29■■□□□ 1.96
LSM8-203ENST00000422760 BSDC1Q9NW68 430 aaPredicted RBP27.29■■□□□ 1.96
LSM8-203ENST00000422760 NOL7Q9UMY1 257 aaKnown RBP27.29■■□□□ 1.96
LSM8-203ENST00000422760 FOXP2O15409 715 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 TOB2Q14106 344 aaPredicted RBP27.28■■□□□ 1.96
LSM8-203ENST00000422760 SLC9C2Q5TAH2 1124 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 CCDC83Q8IWF9 413 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 ST3GAL1Q11201 340 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 CELF1Q92879 486 aaKnown RBP27.28■■□□□ 1.96
LSM8-203ENST00000422760 NLRP3Q96P20 1036 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 CCDC39Q9UFE4 941 aa27.28■■□□□ 1.96
LSM8-203ENST00000422760 NSFL1CQ9UNZ2 370 aaKnown RBP27.28■■□□□ 1.96
LSM8-203ENST00000422760 CARMIL3Q8ND23 1372 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 A0A0G2JLW4 131 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 GPAA1O43292 621 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 ADRA2BP18089 450 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 BCAMP50895 628 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 CCDC24Q8N4L8 307 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 TRIM37O94972 964 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 UBE3CQ15386 1083 aa27.26■■□□□ 1.95
LSM8-203ENST00000422760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.25■■□□□ 1.95
LSM8-203ENST00000422760 NAP1L5Q96NT1 182 aaPredicted RBP27.25■■□□□ 1.95
LSM8-203ENST00000422760 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.25■■□□□ 1.95
LSM8-203ENST00000422760 WWC3Q9ULE0 1092 aa27.25■■□□□ 1.95
LSM8-203ENST00000422760 PDE6AP16499 860 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 TERF1P54274 439 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 SLC27A3Q5K4L6 730 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 TTLL5Q6EMB2 1281 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 ZNF500O60304 480 aaPredicted RBP27.24■■□□□ 1.95
LSM8-203ENST00000422760 NECAB1Q8N987 351 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 MINPP1Q9UNW1 487 aa27.24■■□□□ 1.95
LSM8-203ENST00000422760 ZNF532Q9HCE3 1301 aa27.23■■□□□ 1.95
LSM8-203ENST00000422760 HMGB1P09429 215 aaKnown RBP27.23■■□□□ 1.95
LSM8-203ENST00000422760 GJB2P29033 226 aa27.23■■□□□ 1.95
LSM8-203ENST00000422760 NFIXQ14938 502 aa27.23■■□□□ 1.95
LSM8-203ENST00000422760 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.23■■□□□ 1.95
LSM8-203ENST00000422760 TCRBV5S4A2TA0A5A2 114 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 E7EWF7 191 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 CTNNA3Q9UI47 895 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 NPHP1O15259 732 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 UBE4AQ14139 1066 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 MTMR6Q9Y217 621 aa27.22■■□□□ 1.95
LSM8-203ENST00000422760 ZNF804BA4D1E1 1349 aa27.21■■□□□ 1.95
LSM8-203ENST00000422760 TCHHQ07283 1943 aa27.21■■□□□ 1.95
LSM8-203ENST00000422760 TPM2P07951 284 aa27.21■■□□□ 1.95
LSM8-203ENST00000422760 RPS8P62241 208 aaKnown RBP27.21■■□□□ 1.95
LSM8-203ENST00000422760 Q6ZUG5 572 aa27.21■■□□□ 1.95
LSM8-203ENST00000422760 CHAMP1Q96JM3 812 aa27.21■■□□□ 1.95
LSM8-203ENST00000422760 FGAP02671 866 aa27.2■■□□□ 1.95
LSM8-203ENST00000422760 WTIPA6NIX2 430 aaPredicted RBP27.2■■□□□ 1.94
LSM8-203ENST00000422760 MAP3K12Q12852 859 aa27.2■■□□□ 1.94
LSM8-203ENST00000422760 IMMTQ16891 758 aaKnown RBP27.2■■□□□ 1.94
LSM8-203ENST00000422760 DHX32Q7L7V1 743 aaKnown RBP27.2■■□□□ 1.94
LSM8-203ENST00000422760 GADD45BO75293 160 aaPredicted RBP27.19■■□□□ 1.94
LSM8-203ENST00000422760 OFD1O75665 1012 aa27.19■■□□□ 1.94
LSM8-203ENST00000422760 ZKSCAN5Q9Y2L8 839 aa27.19■■□□□ 1.94
LSM8-203ENST00000422760 GYG1P46976 350 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 CNBD1Q8NA66 436 aa27.18■■□□□ 1.94
LSM8-203ENST00000422760 LRRC2Q9BYS8 371 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms