RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 ZNF213O14771 459 aa16.1■□□□□ 0.17
CTCFL-203ENST00000422109 ITGA6P23229 1130 aa16.1■□□□□ 0.17
CTCFL-203ENST00000422109 PIGBQ92521 554 aa16.1■□□□□ 0.17
CTCFL-203ENST00000422109 ZNF396Q96N95 335 aaPredicted RBP16.1■□□□□ 0.17
CTCFL-203ENST00000422109 LLPHQ9BRT6 129 aaKnown RBP16.1■□□□□ 0.17
CTCFL-203ENST00000422109 PCDHA7Q9UN72 937 aa16.1■□□□□ 0.17
CTCFL-203ENST00000422109 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 KIF1AQ12756 1690 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 MARCKSP29966 332 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-203ENST00000422109 CHAF1AQ13111 956 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-203ENST00000422109 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
CTCFL-203ENST00000422109 AOPEPQ8N6M6 819 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
CTCFL-203ENST00000422109 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 RCOR1Q9UKL0 485 aa16.09■□□□□ 0.17
CTCFL-203ENST00000422109 MCAMP43121 646 aa16.08■□□□□ 0.17
CTCFL-203ENST00000422109 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.17
CTCFL-203ENST00000422109 GPR108Q9NPR9 543 aa16.08■□□□□ 0.17
CTCFL-203ENST00000422109 COL18A1P39060 1754 aa16.08■□□□□ 0.17
CTCFL-203ENST00000422109 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
CTCFL-203ENST00000422109 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 SPTLC3Q9NUV7 552 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 TRMT112Q9UI30 125 aaKnown RBP16.08■□□□□ 0.16
CTCFL-203ENST00000422109 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 ADAMTSL3P82987 1691 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 NDUFA8P51970 172 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 TDRD7Q8NHU6 1098 aaKnown RBP16.08■□□□□ 0.16
CTCFL-203ENST00000422109 PHKBQ93100 1093 aa16.08■□□□□ 0.16
CTCFL-203ENST00000422109 ANTXR2P58335 489 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 MICU3Q86XE3 530 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 TOMM22Q9NS69 142 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 TRMT1Q9NXH9 659 aaKnown RBP16.07■□□□□ 0.16
CTCFL-203ENST00000422109 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 CIAO1O76071 339 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 ZRSR1Q15695 479 aaKnown RBP16.07■□□□□ 0.16
CTCFL-203ENST00000422109 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-203ENST00000422109 AEBP2Q6ZN18 517 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-203ENST00000422109 ZNF274Q96GC6 653 aaPredicted RBP16.07■□□□□ 0.16
CTCFL-203ENST00000422109 CTNNA3Q9UI47 895 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 LAMA4Q16363 1823 aa16.07■□□□□ 0.16
CTCFL-203ENST00000422109 KIF28PB7ZC32 967 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
CTCFL-203ENST00000422109 STX1AQ16623 288 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 PLA2G4DQ86XP0 818 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 APPBP2Q92624 585 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 B4E1Z4 1266 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 RBM43Q6ZSC3 357 aaKnown RBP16.06■□□□□ 0.16
CTCFL-203ENST00000422109 PRIMPOLQ96LW4 560 aa16.06■□□□□ 0.16
CTCFL-203ENST00000422109 PHKA1P46020 1223 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 TRDNQ13061 729 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 IQCB1Q15051 598 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 NFXL1Q6ZNB6 911 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 ZMYND15Q9H091 742 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 BCL2L12Q9HB09 334 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 PIH1D3Q9NQM4 214 aaKnown RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 SLAIN2Q9P270 581 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 IRS4O14654 1257 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 ZBTB38Q8NAP3 1195 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 MRPS27Q92552 414 aaKnown RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 BTG4Q9NY30 223 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 TPM3P06753 285 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 NAA30Q147X3 362 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 AGXT2Q9BYV1 514 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 ATG3Q9NT62 314 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
CTCFL-203ENST00000422109 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
CTCFL-203ENST00000422109 STARD3NLO95772 234 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 PCCAP05165 728 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-203ENST00000422109 TNNT1P13805 278 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 CYB5R4Q7L1T6 521 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 SALL1Q9NSC2 1324 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 ANKRD18BA2A2Z9 1011 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 USP27XA6NNY8 438 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 MB21D2Q8IYB1 491 aaPredicted RBP16.04■□□□□ 0.16
CTCFL-203ENST00000422109 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
CTCFL-203ENST00000422109 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
CTCFL-203ENST00000422109 DPCR1Q3MIW9 517 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 CPDO75976 1380 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 SPTLC2O15270 562 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 SMC2O95347 1197 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
CTCFL-203ENST00000422109 ENGASEQ8NFI3 743 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms