RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 SRGNP10124 158 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 QPCTQ16769 361 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 PTPRNQ16849 979 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 SUSD4Q5VX71 490 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 PLBD2Q8NHP8 589 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 TSR2Q969E8 191 aaKnown RBP9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 MASTLQ96GX5 879 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 SCN7AQ01118 1682 aa9.73□□□□□ -0.85
AC012560.1-202ENST00000421324 CCER2I3L3R5 266 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 CCNYL3P0C7X3 344 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 NPR1P16066 1061 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 TCIRG1Q13488 830 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 STK31Q9BXU1 1019 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 MYH16Q9H6N6 1097 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 EVA1BQ9NVM1 165 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 AFDNP55196 1824 aaKnown RBP9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 ATP10DQ9P241 1426 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 CHD4Q14839 1912 aa9.72□□□□□ -0.85
AC012560.1-202ENST00000421324 NRXN2Q9P2S2 1712 aa9.71□□□□□ -0.85
AC012560.1-202ENST00000421324 KLRG2A4D1S0 409 aaPredicted RBP9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 C21orf2O43822 256 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 DDX58O95786 925 aaKnown RBP9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 CLK2P49760 499 aaKnown RBP9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 FOXC1Q12948 553 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 TWISTNBQ3B726 338 aaPredicted RBP9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 SOGA3Q5TF21 947 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 TSPYL6Q8N831 410 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
AC012560.1-202ENST00000421324 NTSR2O95665 410 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 SKOR1P84550 965 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 DIEXFQ68CQ4 756 aaKnown RBP9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 TRAF7Q6Q0C0 670 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 NLRP10Q86W26 655 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 DDRGK1Q96HY6 314 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 PHAXQ9H814 394 aaKnown RBP9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 UBN2Q6ZU65 1347 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 KIAA1551Q9HCM1 1747 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 BCORQ6W2J9 1755 aa9.7□□□□□ -0.86
AC012560.1-202ENST00000421324 WNT7AO00755 349 aa9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 SKIV2LQ15477 1246 aaKnown RBP9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 SLC10A5Q5PT55 438 aa9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 RNF123Q5XPI4 1314 aa9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 PRPF40BQ6NWY9 871 aaKnown RBP9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 FANCIQ9NVI1 1328 aa9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 RNF181Q9P0P0 153 aa9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 IBTKQ9P2D0 1353 aaPredicted RBP9.69□□□□□ -0.86
AC012560.1-202ENST00000421324 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 TCERG1O14776 1098 aaKnown RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 LMNB1P20700 586 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 HOXA10P31260 410 aaPredicted RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 EXOSC9Q06265 439 aaKnown RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 KCNH2Q12809 1159 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 CRY2Q49AN0 593 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 TPRNQ4KMQ1 711 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 RTL5Q5HYW3 569 aaPredicted RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 TMX4Q9H1E5 349 aaPredicted RBP9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 NUP98P52948 1817 aa9.68□□□□□ -0.86
AC012560.1-202ENST00000421324 VAMP4O75379 141 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 DGAT1O75907 488 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 HSP90B1P14625 803 aaKnown RBP9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 WNT7BP56706 349 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 CRAMP1Q96RY5 1269 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 ISCA1Q9BUE6 129 aa9.67□□□□□ -0.86
AC012560.1-202ENST00000421324 ABCC12Q96J65 1359 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 NFKBIEO00221 500 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 HCLS1P14317 486 aaPredicted RBP9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 RASSF7Q02833 373 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 NEXNQ0ZGT2 675 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 CCDC93Q567U6 631 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 CC2D2BQ6DHV5 1058 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 CCDC191Q8NCU4 936 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 C7orf43Q8WVR3 580 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 FAM89AQ96GI7 184 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 MYD88Q99836 296 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 METTL22Q9BUU2 404 aaPredicted RBP9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 TAOK3Q9H2K8 898 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 BRCA1P38398 1863 aaKnown RBP9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 ANKRD31Q8N7Z5 1873 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
AC012560.1-202ENST00000421324 ADCY9O60503 1353 aa9.65□□□□□ -0.86
AC012560.1-202ENST00000421324 KDM2BQ8NHM5 1336 aa9.65□□□□□ -0.86
AC012560.1-202ENST00000421324 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms