RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ZNF804AQ7Z570 1209 aa16.99■□□□□ 0.31
AP000550.1-201ENST00000420508 VPS36Q86VN1 386 aa16.99■□□□□ 0.31
AP000550.1-201ENST00000420508 ARHGEF25Q86VW2 580 aa16.99■□□□□ 0.31
AP000550.1-201ENST00000420508 TRIM75PA6NK02 468 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 RFC4P35249 363 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 GOLGA6L10A6NI86 522 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 PPP1R2P41236 205 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 SNW1Q13573 536 aaKnown RBP16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 JARID2Q92833 1246 aaPredicted RBP16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 TERF1P54274 439 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 PIP4K2BP78356 416 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 TAF4BQ92750 862 aa16.98■□□□□ 0.31
AP000550.1-201ENST00000420508 ELP1O95163 1332 aa16.97■□□□□ 0.31
AP000550.1-201ENST00000420508 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
AP000550.1-201ENST00000420508 LMBRD1Q9NUN5 540 aa16.97■□□□□ 0.31
AP000550.1-201ENST00000420508 APOBRQ0VD83 1088 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 RILPL1Q5EBL4 403 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 TAF3Q5VWG9 929 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 STXBP4Q6ZWJ1 553 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 MPNDQ8N594 471 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 LPIN2Q92539 896 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 NAP1L4Q99733 375 aaKnown RBP16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 CLSTN2Q9H4D0 955 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 SSBP05455 408 aaKnown RBP eCLIP16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 CABLES1Q8TDN4 633 aa16.96■□□□□ 0.31
AP000550.1-201ENST00000420508 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
AP000550.1-201ENST00000420508 CEP135Q66GS9 1140 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 ZHX3Q9H4I2 956 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 UBASH3AP57075 661 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 ARHGEF40Q8TER5 1519 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 KRT2P35908 639 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 TCEANC2Q96MN5 208 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 CIAO1O76071 339 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 JAKMIP3Q5VZ66 844 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 ANGEL1Q9UNK9 670 aaKnown RBP16.95■□□□□ 0.3
AP000550.1-201ENST00000420508 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 LRRC2Q9BYS8 371 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 LRRC7Q96NW7 1537 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 MPHOSPH10O00566 681 aaKnown RBP16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 ITGA6P23229 1130 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 CCDC96Q2M329 555 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 ZNF274Q96GC6 653 aaPredicted RBP16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 PANK2Q9BZ23 570 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 DEPDC5O75140 1603 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 DEXIO95424 95 aa16.94■□□□□ 0.3
AP000550.1-201ENST00000420508 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 KIF4BQ2VIQ3 1234 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 KRI1Q8N9T8 703 aaKnown RBP16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 VWDEQ8N2E2 1590 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 KIDINS220Q9ULH0 1771 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 URI1O94763 535 aaPredicted RBP16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 HAUS7Q99871 368 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 PTPRMP28827 1452 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 CACNA2D4Q7Z3S7 1137 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 ERMNQ8TAM6 284 aa16.93■□□□□ 0.3
AP000550.1-201ENST00000420508 CCDC82Q8N4S0 544 aa16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 SKILP12757 684 aa16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 CCDC186Q7Z3E2 898 aa16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 ALS2CR12Q96Q35 445 aa16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 C6orf50Q9HD87 102 aa16.92■□□□□ 0.3
AP000550.1-201ENST00000420508 BIN1O00499 593 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 PCCAP05165 728 aaPredicted RBP16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 C6orf229H3BNL8 230 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 MTIF2P46199 727 aaKnown RBP16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 FAM227BQ96M60 508 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 AOPEPQ8N6M6 819 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 GTF3C6Q969F1 213 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 CABP5Q9NP86 173 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 EXOC1Q9NV70 894 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 RTCBQ9Y3I0 505 aaKnown RBP16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 PSMA7O14818 248 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 TUBBP07437 444 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 GNA11P29992 359 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 POLA2Q14181 598 aa16.91■□□□□ 0.3
AP000550.1-201ENST00000420508 CUTAO60888 179 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 CUL4AQ13619 759 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 AXDND1Q5T1B0 1012 aaPredicted RBP16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 WWC2Q6AWC2 1192 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 PIBF1Q8WXW3 757 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 POTEJP0CG39 1038 aa16.9■□□□□ 0.3
AP000550.1-201ENST00000420508 PAFAH1B1P43034 410 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms