RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 BCS1LQ9Y276 419 aa15.48■□□□□ 0.07
LINC00642-201ENST00000419459 MYO5AQ9Y4I1 1855 aaKnown RBP15.47■□□□□ 0.07
LINC00642-201ENST00000419459 MYH13Q9UKX3 1938 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
LINC00642-201ENST00000419459 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.47■□□□□ 0.07
LINC00642-201ENST00000419459 MPNDQ8N594 471 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
LINC00642-201ENST00000419459 SNRKQ9NRH2 765 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 GGA1Q9UJY5 639 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 TTC41PQ6P2S7 1318 aa15.47■□□□□ 0.07
LINC00642-201ENST00000419459 TRIM6-TRIM34B2RNG4 842 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 RIMBP2O15034 1052 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 TTC39AQ5SRH9 613 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 GAS2L3Q86XJ1 694 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 OFD1O75665 1012 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 MCAMP43121 646 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 KLHL40Q2TBA0 621 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 DALRD3Q5D0E6 543 aaKnown RBP15.46■□□□□ 0.07
LINC00642-201ENST00000419459 CCDC158Q5M9N0 1113 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 FAM84BQ96KN1 310 aaPredicted RBP15.46■□□□□ 0.07
LINC00642-201ENST00000419459 SYT17Q9BSW7 474 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
LINC00642-201ENST00000419459 PODXL2Q9NZ53 605 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 JAG2Q9Y219 1238 aa15.46■□□□□ 0.07
LINC00642-201ENST00000419459 SNED1Q8TER0 1413 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 GLRX3O76003 335 aaKnown RBP15.45■□□□□ 0.06
LINC00642-201ENST00000419459 SDSP20132 328 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
LINC00642-201ENST00000419459 VPS37DQ86XT2 251 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 RILPL2Q969X0 211 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 CHD4Q14839 1912 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 IRS2Q9Y4H2 1338 aa15.45■□□□□ 0.06
LINC00642-201ENST00000419459 K7ELQ4 463 aaPredicted RBP15.44■□□□□ 0.06
LINC00642-201ENST00000419459 ERC2O15083 957 aa15.44■□□□□ 0.06
LINC00642-201ENST00000419459 NASPP49321 788 aaPredicted RBP15.44■□□□□ 0.06
LINC00642-201ENST00000419459 RASGRF1Q13972 1273 aa15.44■□□□□ 0.06
LINC00642-201ENST00000419459 LEMD3Q9Y2U8 911 aa15.44■□□□□ 0.06
LINC00642-201ENST00000419459 ATP5JP18859 108 aa15.44■□□□□ 0.06
LINC00642-201ENST00000419459 KIAA1211Q6ZU35 1233 aa15.44■□□□□ 0.06
LINC00642-201ENST00000419459 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
LINC00642-201ENST00000419459 CHGBP05060 677 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 CAVIN4Q5BKX8 364 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 GOLIM4O00461 696 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 ATP2B4P23634 1241 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 MSNP26038 577 aaKnown RBP15.43■□□□□ 0.06
LINC00642-201ENST00000419459 ZAP70P43403 619 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 AOX1Q06278 1338 aa15.43■□□□□ 0.06
LINC00642-201ENST00000419459 FER1L6Q2WGJ9 1857 aa15.42■□□□□ 0.06
LINC00642-201ENST00000419459 HIBADHP31937 336 aaKnown RBP15.42■□□□□ 0.06
LINC00642-201ENST00000419459 ZNF445P59923 1031 aa15.42■□□□□ 0.06
LINC00642-201ENST00000419459 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
LINC00642-201ENST00000419459 CCDC93Q567U6 631 aa15.42■□□□□ 0.06
LINC00642-201ENST00000419459 ARFGEF1Q9Y6D6 1849 aa15.42■□□□□ 0.06
LINC00642-201ENST00000419459 ARID4AP29374 1257 aaPredicted RBP15.41■□□□□ 0.06
LINC00642-201ENST00000419459 AOC3Q16853 763 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 DOK7Q18PE1 504 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 TBC1D9Q6ZT07 1266 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 KIF2CQ99661 725 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 HAUS7Q99871 368 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 HMG20BQ9P0W2 317 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 MED23Q9ULK4 1368 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 FBXO33Q7Z6M2 555 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 DBNDD1Q9H9R9 158 aa15.41■□□□□ 0.06
LINC00642-201ENST00000419459 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
LINC00642-201ENST00000419459 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
LINC00642-201ENST00000419459 CYP2E1P05181 493 aaPredicted RBP15.4■□□□□ 0.06
LINC00642-201ENST00000419459 SPATA5Q8NB90 893 aa15.4■□□□□ 0.06
LINC00642-201ENST00000419459 ZC3H12CQ9C0D7 883 aaKnown RBP15.4■□□□□ 0.06
LINC00642-201ENST00000419459 PAG1Q9NWQ8 432 aa15.4■□□□□ 0.06
LINC00642-201ENST00000419459 CCDC88AQ3V6T2 1871 aa15.4■□□□□ 0.06
LINC00642-201ENST00000419459 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
LINC00642-201ENST00000419459 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
LINC00642-201ENST00000419459 COL4A5P29400 1685 aa15.39■□□□□ 0.05
LINC00642-201ENST00000419459 NFKBIEO00221 500 aa15.39■□□□□ 0.05
LINC00642-201ENST00000419459 ZNF804AQ7Z570 1209 aa15.39■□□□□ 0.05
LINC00642-201ENST00000419459 CD209Q9NNX6 404 aa15.39■□□□□ 0.05
LINC00642-201ENST00000419459 KCNQ5Q9NR82 932 aa15.39■□□□□ 0.05
LINC00642-201ENST00000419459 ZNF500O60304 480 aaPredicted RBP15.38■□□□□ 0.05
LINC00642-201ENST00000419459 RASSF7Q02833 373 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 CNTROBQ8N137 903 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 FSD1Q9BTV5 496 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
LINC00642-201ENST00000419459 MYH7P12883 1935 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 UQCRFS1P1P0C7P4 283 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 MCM5P33992 734 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 NUCB2P80303 420 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 RTKN2Q8IZC4 609 aa15.38■□□□□ 0.05
LINC00642-201ENST00000419459 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
LINC00642-201ENST00000419459 DDX49Q9Y6V7 483 aaKnown RBP15.38■□□□□ 0.05
LINC00642-201ENST00000419459 YBX3P16989 372 aaKnown RBP eCLIP15.37■□□□□ 0.05
LINC00642-201ENST00000419459 EVI5LQ96CN4 794 aa15.37■□□□□ 0.05
LINC00642-201ENST00000419459 IL25Q9H293 177 aa15.37■□□□□ 0.05
LINC00642-201ENST00000419459 PIH1D3Q9NQM4 214 aaKnown RBP15.37■□□□□ 0.05
LINC00642-201ENST00000419459 GNL3LQ9NVN8 582 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms