RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FLAD1Q8NFF5 587 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 STK32AQ8WU08 396 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 MYBBP1AQ9BQG0 1328 aaKnown RBP9.19□□□□□ -0.94
HMGN1-205ENST00000419378 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
HMGN1-205ENST00000419378 GTF2IP78347 998 aa9.18□□□□□ -0.94
HMGN1-205ENST00000419378 USP4Q13107 963 aa9.18□□□□□ -0.94
HMGN1-205ENST00000419378 ZNF598Q86UK7 904 aaKnown RBP9.18□□□□□ -0.94
HMGN1-205ENST00000419378 CEMIPQ8WUJ3 1361 aa9.18□□□□□ -0.94
HMGN1-205ENST00000419378 ZNF594Q96JF6 807 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-205ENST00000419378 DNAAF2Q9NVR5 837 aaKnown RBP9.18□□□□□ -0.94
HMGN1-205ENST00000419378 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 TMEM88BA6NKF7 163 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 ADH1CP00326 375 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 SSFA2P28290 1259 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 POLD1P28340 1107 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 ATP1A2P50993 1020 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 SLC39A6Q13433 755 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 TMEM164Q5U3C3 297 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 MSL1Q68DK7 614 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 SMIM5Q71RC9 77 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 IL17REQ8NFR9 667 aa9.17□□□□□ -0.94
HMGN1-205ENST00000419378 FHDC1Q9C0D6 1143 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-205ENST00000419378 MYH14Q7Z406 1995 aaKnown RBP9.17□□□□□ -0.94
HMGN1-205ENST00000419378 ZBTB7BO15156 539 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-205ENST00000419378 SCTRP47872 440 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 TEFQ10587 303 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 TMPRSS4Q9NRS4 437 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 PKD2L1Q9P0L9 805 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 KIAA1024Q9UPX6 916 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 C4AP0C0L4 1744 aa9.16□□□□□ -0.94
HMGN1-205ENST00000419378 MYCP01106 439 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-205ENST00000419378 DPYDQ12882 1025 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 NR5A1Q13285 461 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 ANKMY2Q8IV38 441 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 DNAJC10Q8IXB1 793 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 LARGE2Q8N3Y3 721 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 PLEKHF1Q96S99 279 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-205ENST00000419378 RTCBQ9Y3I0 505 aaKnown RBP9.15□□□□□ -0.94
HMGN1-205ENST00000419378 PCDHGA11Q9Y5H2 935 aa9.15□□□□□ -0.94
HMGN1-205ENST00000419378 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-205ENST00000419378 DLG5Q8TDM6 1919 aa9.15□□□□□ -0.95
HMGN1-205ENST00000419378 MAPK8IP3Q9UPT6 1336 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 NEFMP07197 916 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 NR3C2P08235 984 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 CRKLP46109 303 aaKnown RBP9.14□□□□□ -0.95
HMGN1-205ENST00000419378 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
HMGN1-205ENST00000419378 PPP1R26Q5T8A7 1209 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-205ENST00000419378 ZNF790Q6PG37 636 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 MCM10Q7L590 875 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 CCDC116Q8IYX3 515 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 TTC5Q8N0Z6 440 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 FAM200AQ8TCP9 573 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
HMGN1-205ENST00000419378 SYT17Q9BSW7 474 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
HMGN1-205ENST00000419378 HEG1Q9ULI3 1381 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 HTATSF1O43719 755 aaKnown RBP9.13□□□□□ -0.95
HMGN1-205ENST00000419378 RPS6KA4O75676 772 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 DCTN1Q14203 1278 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 TRAPPC3LQ5T215 181 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 CCDC102BQ68D86 513 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 INTS5Q6P9B9 1019 aaKnown RBP9.13□□□□□ -0.95
HMGN1-205ENST00000419378 ZNF784Q8NCA9 323 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-205ENST00000419378 TPCN2Q8NHX9 752 aa9.13□□□□□ -0.95
HMGN1-205ENST00000419378 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
HMGN1-205ENST00000419378 PNNQ9H307 717 aaKnown RBP9.13□□□□□ -0.95
HMGN1-205ENST00000419378 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 KCNQ3O43525 872 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 DKK1O94907 266 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
HMGN1-205ENST00000419378 NFE2L2Q16236 605 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 SIX5Q8N196 739 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 CCDC87Q9NVE4 849 aa9.12□□□□□ -0.95
HMGN1-205ENST00000419378 SOS1Q07889 1333 aaPredicted RBP9.11□□□□□ -0.95
HMGN1-205ENST00000419378 USP42Q9H9J4 1324 aaKnown RBP9.11□□□□□ -0.95
HMGN1-205ENST00000419378 GYS1P13807 737 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 RFC4P35249 363 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 WDR43Q15061 677 aaKnown RBP eCLIP9.11□□□□□ -0.95
HMGN1-205ENST00000419378 KCTD17Q8N5Z5 321 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
HMGN1-205ENST00000419378 FMNL2Q96PY5 1086 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 ZBTB1Q9Y2K1 713 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 KDM3BQ7LBC6 1761 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 COL15A1P39059 1388 aa9.11□□□□□ -0.95
HMGN1-205ENST00000419378 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 TNFRSF10AO00220 468 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 GDF9O60383 454 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 LILRA1O75019 489 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 STARD3NLO95772 234 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 MMP10P09238 476 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 NNTQ13423 1086 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 CCDC146Q8IYE0 955 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
HMGN1-205ENST00000419378 OSBPL3Q9H4L5 887 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms