RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
PMS1-206ENST00000418224 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
PMS1-206ENST00000418224 TAF5LO75529 589 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 APPP05067 770 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 MYL6BP14649 208 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 SKIDA1Q1XH10 827 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 TRIM65Q6PJ69 517 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 Q6ZUG5 572 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 NEK1Q96PY6 1258 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 PHLPP2Q6ZVD8 1323 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 SRRTQ9BXP5 876 aaKnown RBP20.22■□□□□ 0.83
PMS1-206ENST00000418224 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
PMS1-206ENST00000418224 LMOD2Q6P5Q4 547 aa20.21■□□□□ 0.83
PMS1-206ENST00000418224 FSIP1Q8NA03 581 aa20.21■□□□□ 0.83
PMS1-206ENST00000418224 NCAPGQ9BPX3 1015 aa20.21■□□□□ 0.83
PMS1-206ENST00000418224 MED23Q9ULK4 1368 aa20.21■□□□□ 0.83
PMS1-206ENST00000418224 ME1P48163 572 aa20.21■□□□□ 0.83
PMS1-206ENST00000418224 SEC62Q99442 399 aaKnown RBP20.21■□□□□ 0.83
PMS1-206ENST00000418224 PLEKHG2Q9H7P9 1386 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 PRR29P0C7W0 189 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 DPCR1Q3MIW9 517 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 GPR161Q8N6U8 529 aaKnown RBP20.2■□□□□ 0.82
PMS1-206ENST00000418224 EIF3CLB5ME19 914 aaKnown RBP20.2■□□□□ 0.82
PMS1-206ENST00000418224 PSME1Q06323 249 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 KRT32Q14532 448 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 LONRF2Q1L5Z9 754 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 EIF3CQ99613 913 aaKnown RBP20.2■□□□□ 0.82
PMS1-206ENST00000418224 PDE11AQ9HCR9 933 aa20.2■□□□□ 0.82
PMS1-206ENST00000418224 LMOD1P29536 600 aaPredicted RBP20.19■□□□□ 0.82
PMS1-206ENST00000418224 MAGEA9P43362 315 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 DEF6Q9H4E7 631 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 PLEKHA4Q9H4M7 779 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 GNG11P61952 73 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 PPP2R3AQ06190 1150 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 NEXNQ0ZGT2 675 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 TUBB4AP04350 444 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 IGKV5-2P06315 115 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 SNRKQ9NRH2 765 aa20.19■□□□□ 0.82
PMS1-206ENST00000418224 IVLP07476 585 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 EPHA10Q5JZY3 1008 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 SLC39A6Q13433 755 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 AMOTQ4VCS5 1084 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 MYD88Q99836 296 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 BRMS1Q9HCU9 246 aa20.18■□□□□ 0.82
PMS1-206ENST00000418224 WDR24Q96S15 920 aa20.17■□□□□ 0.82
PMS1-206ENST00000418224 DDX21Q9NR30 783 aaKnown RBP eCLIP20.17■□□□□ 0.82
PMS1-206ENST00000418224 PSD3Q9NYI0 1048 aa20.17■□□□□ 0.82
PMS1-206ENST00000418224 PHACTR2O75167 634 aa20.17■□□□□ 0.82
PMS1-206ENST00000418224 FAM160A1Q05DH4 1040 aa20.17■□□□□ 0.82
PMS1-206ENST00000418224 USP28Q96RU2 1077 aa20.17■□□□□ 0.82
PMS1-206ENST00000418224 ALDH8A1Q9H2A2 487 aaPredicted RBP20.17■□□□□ 0.82
PMS1-206ENST00000418224 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
PMS1-206ENST00000418224 ANKARQ7Z5J8 1434 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 A0A1B0GVL5 298 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 CCP110O43303 1012 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 N4BP1O75113 896 aaKnown RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 GUCY1B3Q02153 619 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 ESCO1Q5FWF5 840 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 DDX46Q7L014 1031 aaKnown RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 SCRN1Q12765 414 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 TFCP2Q12800 502 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 MYCNP04198 464 aaPredicted RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 CYP21A2P08686 494 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 PIP4K2AP48426 406 aaPredicted RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 CCT2P78371 535 aaKnown RBP20.16■□□□□ 0.82
PMS1-206ENST00000418224 TSGA10IPQ3SY00 556 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 PXDNQ92626 1479 aa20.16■□□□□ 0.82
PMS1-206ENST00000418224 MED1Q15648 1581 aaPredicted RBP20.15■□□□□ 0.82
PMS1-206ENST00000418224 KDM3BQ7LBC6 1761 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 COL15A1P39059 1388 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 ATP1A3P13637 1013 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 PSEN1P49768 467 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 THEMISQ8N1K5 641 aaPredicted RBP20.15■□□□□ 0.82
PMS1-206ENST00000418224 ATP2B1P20020 1258 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 IQUBQ8NA54 791 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 XAGE3Q8WTP9 111 aa20.15■□□□□ 0.82
PMS1-206ENST00000418224 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.82
PMS1-206ENST00000418224 WWC2Q6AWC2 1192 aa20.14■□□□□ 0.82
PMS1-206ENST00000418224 ENGASEQ8NFI3 743 aa20.14■□□□□ 0.82
PMS1-206ENST00000418224 RCOR1Q9UKL0 485 aa20.14■□□□□ 0.82
PMS1-206ENST00000418224 FAN1Q9Y2M0 1017 aa20.14■□□□□ 0.82
PMS1-206ENST00000418224 U3KPZ7 1027 aaPredicted RBP20.14■□□□□ 0.82
PMS1-206ENST00000418224 LTN1O94822 1766 aa20.14■□□□□ 0.82
PMS1-206ENST00000418224 ADGRL3Q9HAR2 1447 aa20.14■□□□□ 0.81
PMS1-206ENST00000418224 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
PMS1-206ENST00000418224 NEURL1BA8MQ27 555 aa20.14■□□□□ 0.81
PMS1-206ENST00000418224 ADD1P35611 737 aaKnown RBP20.13■□□□□ 0.81
PMS1-206ENST00000418224 KCNJ6P48051 423 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 FANCCQ00597 558 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 KCNH5Q8NCM2 988 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 UTYO14607 1347 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 MMP14P50281 582 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 APOBRQ0VD83 1088 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 GCKRQ14397 625 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 TNNI3KQ59H18 835 aa20.13■□□□□ 0.81
PMS1-206ENST00000418224 USPL1Q5W0Q7 1092 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms