RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 BCAP29Q9UHQ4 241 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 MAPKBP1O60336 1514 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 FLOT1O75955 427 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 ELF1P32519 619 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 EXOSC9Q06265 439 aaKnown RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 TAF11Q15544 211 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 TAF7Q15545 349 aaPredicted RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 GFM2Q969S9 779 aaKnown RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 POTEJP0CG39 1038 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 PLPPR3Q6T4P5 718 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
SATB1-204ENST00000417717 KCNK9Q9NPC2 374 aa11.61□□□□□ -0.55
SATB1-204ENST00000417717 IFT20Q8IY31 132 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 FBXO41Q8TF61 875 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 EIF2AQ9BY44 585 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 PHAXQ9H814 394 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 NOB1Q9ULX3 412 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 RNF40O75150 1001 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 RAB11FIP3O75154 756 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 NBPF10Q6P3W6 841 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 TAOK1Q7L7X3 1001 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 AFAP1Q8N556 730 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 TMX3Q96JJ7 454 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 CENPKQ9BS16 269 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 TTF2Q9UNY4 1162 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 APBA1Q02410 837 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 TRPC3Q13507 836 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 NBPF20Q3BBV1 942 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 ACBD5Q5T8D3 534 aaPredicted RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 PAK2Q13177 524 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 FAM212AQ96EL1 285 aa11.6□□□□□ -0.55
SATB1-204ENST00000417717 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
SATB1-204ENST00000417717 ATP2A1O14983 1001 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 POLD1P28340 1107 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 CNGA4Q8IV77 575 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.59□□□□□ -0.55
SATB1-204ENST00000417717 PALMDQ9NP74 551 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 TROVE2P10155 538 aaKnown RBP eCLIP11.59□□□□□ -0.55
SATB1-204ENST00000417717 GJB2P29033 226 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 CAPZA3Q96KX2 299 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 SPAG5Q96R06 1193 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 TSG101Q99816 390 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 CCDC68Q9H2F9 335 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 RTEL1-TNFRSF6BF6WH68 1400 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 ERBINQ96RT1 1412 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 MTIF2P46199 727 aaKnown RBP11.59□□□□□ -0.55
SATB1-204ENST00000417717 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 SAFB2Q14151 953 aaKnown RBP eCLIP11.59□□□□□ -0.55
SATB1-204ENST00000417717 CFAP157Q5JU67 520 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 C8orf74Q6P047 294 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 TBC1D9Q6ZT07 1266 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 APBB1IPQ7Z5R6 666 aaPredicted RBP11.59□□□□□ -0.55
SATB1-204ENST00000417717 C1orf115Q9H7X2 142 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 EVI5O60447 810 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 ZNF75DP51815 510 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 GNPTABQ3T906 1256 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 UBLCP1Q8WVY7 318 aaPredicted RBP11.59□□□□□ -0.55
SATB1-204ENST00000417717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.59□□□□□ -0.55
SATB1-204ENST00000417717 IFNKQ9P0W0 207 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
SATB1-204ENST00000417717 WDR7Q9Y4E6 1490 aa11.58□□□□□ -0.55
SATB1-204ENST00000417717 DUOX2Q9NRD8 1548 aa11.58□□□□□ -0.55
SATB1-204ENST00000417717 LMBR1Q8WVP7 490 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 C8orf76Q96K31 380 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 FAM204AQ9H8W3 233 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 GUCA1BQ9UMX6 200 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 BICDL2A1A5D9 508 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 ZBTB22O15209 634 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 PHEXP78562 749 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 CTNNA3Q9UI47 895 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 EID1Q9Y6B2 187 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
SATB1-204ENST00000417717 LRPPRCP42704 1394 aaKnown RBP11.58□□□□□ -0.56
SATB1-204ENST00000417717 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
SATB1-204ENST00000417717 SND1Q7KZF4 910 aaKnown RBP eCLIP11.58□□□□□ -0.56
SATB1-204ENST00000417717 UTP6Q9NYH9 597 aaKnown RBP11.58□□□□□ -0.56
SATB1-204ENST00000417717 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
SATB1-204ENST00000417717 ACRBPQ8NEB7 543 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 CXorf38Q8TB03 319 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 INTS4Q96HW7 963 aaKnown RBP11.57□□□□□ -0.56
SATB1-204ENST00000417717 PPANQ9NQ55 473 aaKnown RBP11.57□□□□□ -0.56
SATB1-204ENST00000417717 KLHL14Q9P2G3 628 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 SEPT2Q15019 361 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 TRIM58Q8NG06 486 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 JAKMIP2Q96AA8 810 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 PDE11AQ9HCR9 933 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 ZSCAN20P17040 1043 aaPredicted RBP11.57□□□□□ -0.56
SATB1-204ENST00000417717 MRPS27Q92552 414 aaKnown RBP11.57□□□□□ -0.56
SATB1-204ENST00000417717 ATP2A3Q93084 1043 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 MYO1BO43795 1136 aa11.57□□□□□ -0.56
SATB1-204ENST00000417717 IFT88Q13099 833 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms