RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ZNF804AQ7Z570 1209 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 AGBL3Q8NEM8 1001 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 ARHGAP45Q92619 1136 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 AKAP11Q9UKA4 1901 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 MYH2Q9UKX2 1941 aa12.8□□□□□ -0.36
HDLBP-206ENST00000417540 CDK5RAP2Q96SN8 1893 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 VEGFBP49765 207 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 GRM1Q13255 1194 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 ITPRIPQ8IWB1 547 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
HDLBP-206ENST00000417540 PGAP2Q9UHJ9 254 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 ABT1Q9ULW3 272 aaKnown RBP12.79□□□□□ -0.36
HDLBP-206ENST00000417540 HTTP42858 3142 aa12.79□□□□□ -0.36
HDLBP-206ENST00000417540 FOXN1O15353 648 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 BCAMP50895 628 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 UBE4AQ14139 1066 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 SCARF1Q14162 830 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 PUM3Q15397 648 aaKnown RBP12.78□□□□□ -0.36
HDLBP-206ENST00000417540 C20orf194Q5TEA3 1177 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 PRAMEF18Q5VWM3 479 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 CYP4F22Q6NT55 531 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 FTSJ3Q8IY81 847 aaKnown RBP12.78□□□□□ -0.36
HDLBP-206ENST00000417540 CDCA5Q96FF9 252 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
HDLBP-206ENST00000417540 FZD1Q9UP38 647 aa12.78□□□□□ -0.36
HDLBP-206ENST00000417540 CLRN2A0PK11 232 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 RASSF10A6NK89 507 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 WNT10BO00744 389 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 AOC2O75106 756 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 PDE8BO95263 885 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 PAXIP1Q6ZW49 1069 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-206ENST00000417540 MOB2Q70IA6 237 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 ZBED3Q96IU2 234 aaPredicted RBP12.77□□□□□ -0.37
HDLBP-206ENST00000417540 MYO3BQ8WXR4 1341 aa12.77□□□□□ -0.37
HDLBP-206ENST00000417540 PHKA1P46020 1223 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 MTX1Q13505 466 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 ATP2B3Q16720 1220 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
HDLBP-206ENST00000417540 TDRD7Q8NHU6 1098 aaKnown RBP12.76□□□□□ -0.37
HDLBP-206ENST00000417540 ZIC5Q96T25 663 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 TLL2Q9Y6L7 1015 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 FAM205AQ6ZU69 1335 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
HDLBP-206ENST00000417540 HIBADHP31937 336 aaKnown RBP12.75□□□□□ -0.37
HDLBP-206ENST00000417540 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
HDLBP-206ENST00000417540 FOCADQ5VW36 1801 aa12.75□□□□□ -0.37
HDLBP-206ENST00000417540 FBXO33Q7Z6M2 555 aa12.75□□□□□ -0.37
HDLBP-206ENST00000417540 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
HDLBP-206ENST00000417540 COPRSQ9NQ92 184 aa12.75□□□□□ -0.37
HDLBP-206ENST00000417540 CENPFP49454 3210 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 CIAO1O76071 339 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 GNAI2P04899 355 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 GNAI3P08754 354 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 TFCP2Q12800 502 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 PI16Q6UXB8 463 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 CDC37L1Q7L3B6 337 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 SAPCD2Q86UD0 394 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
HDLBP-206ENST00000417540 DDX60LQ5H9U9 1706 aaKnown RBP12.74□□□□□ -0.37
HDLBP-206ENST00000417540 BRCA2P51587 3418 aa12.74□□□□□ -0.37
HDLBP-206ENST00000417540 PITPNM2Q9BZ72 1349 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 WDR33Q9C0J8 1336 aaKnown RBP12.73□□□□□ -0.37
HDLBP-206ENST00000417540 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
HDLBP-206ENST00000417540 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 SLC5A1P13866 664 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 CEP85Q6P2H3 762 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 DCPSQ96C86 337 aaKnown RBP12.73□□□□□ -0.37
HDLBP-206ENST00000417540 CAPNS2Q96L46 248 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 COG6Q9Y2V7 657 aa12.73□□□□□ -0.37
HDLBP-206ENST00000417540 PRDX5P30044 214 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 CACNB3P54284 484 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 POLA2Q14181 598 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 SULF1Q8IWU6 871 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 LPIN2Q92539 896 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 VEZTQ9HBM0 779 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
HDLBP-206ENST00000417540 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 RCAN3Q9UKA8 241 aa12.72□□□□□ -0.37
HDLBP-206ENST00000417540 TTF2Q9UNY4 1162 aaKnown RBP12.72□□□□□ -0.37
HDLBP-206ENST00000417540 RFX7Q2KHR2 1363 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
HDLBP-206ENST00000417540 IL15P40933 162 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-206ENST00000417540 HUNKP57058 714 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 RASGRF1Q13972 1273 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 DIXDC1Q155Q3 683 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 PRMT6Q96LA8 375 aaPredicted RBP12.71□□□□□ -0.37
HDLBP-206ENST00000417540 NAV1Q8NEY1 1877 aa12.71□□□□□ -0.37
HDLBP-206ENST00000417540 ATAD5Q96QE3 1844 aa12.71□□□□□ -0.38
HDLBP-206ENST00000417540 ZSWIM8A7E2V4 1837 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms