RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ANTXR2P58335 489 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 NAA30Q147X3 362 aaPredicted RBP16.92■□□□□ 0.3
HDAC9-208ENST00000417496 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
HDAC9-208ENST00000417496 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 LRRC8AQ8IWT6 810 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 AOPEPQ8N6M6 819 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 RXRAP19793 462 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 GPTP24298 496 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 TPD52L1Q16890 204 aaPredicted RBP16.92■□□□□ 0.3
HDAC9-208ENST00000417496 FMR1NBQ8N0W7 255 aaPredicted RBP16.92■□□□□ 0.3
HDAC9-208ENST00000417496 ZNF592Q92610 1267 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 C8orf76Q96K31 380 aa16.92■□□□□ 0.3
HDAC9-208ENST00000417496 BIN1O00499 593 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 CBX1P83916 185 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 TCIRG1Q13488 830 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 SF3A1Q15459 793 aaKnown RBP16.91■□□□□ 0.3
HDAC9-208ENST00000417496 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 AIFM3Q96NN9 605 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 ORC3Q9UBD5 711 aaPredicted RBP16.91■□□□□ 0.3
HDAC9-208ENST00000417496 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 KIF28PB7ZC32 967 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 CTAGE5O15320 804 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 LINC00301Q8NCQ3 95 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
HDAC9-208ENST00000417496 GPAA1O43292 621 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 ATP2B3Q16720 1220 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 ISM2Q6H9L7 571 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 MRPS27Q92552 414 aaKnown RBP16.9■□□□□ 0.3
HDAC9-208ENST00000417496 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 CAVIN2O95810 425 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 IFIT5Q13325 482 aaKnown RBP16.9■□□□□ 0.3
HDAC9-208ENST00000417496 STK38Q15208 465 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 DPCR1Q3MIW9 517 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 DNAJC10Q8IXB1 793 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
HDAC9-208ENST00000417496 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 RTEL1Q9NZ71 1219 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 CTNNA3Q9UI47 895 aa16.9■□□□□ 0.3
HDAC9-208ENST00000417496 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 ZNF213O14771 459 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 CPLX1O14810 134 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 MCAMP43121 646 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 EVCP57679 992 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 ADALQ6DHV7 355 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 SARM1Q6SZW1 724 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 FBXO18Q8NFZ0 1043 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
HDAC9-208ENST00000417496 SKILP12757 684 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 IL2RBP14784 551 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 HLFQ16534 295 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 INCENPQ9NQS7 918 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
HDAC9-208ENST00000417496 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 MARCKSP29966 332 aaPredicted RBP16.88■□□□□ 0.29
HDAC9-208ENST00000417496 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
HDAC9-208ENST00000417496 APPBP2Q92624 585 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 MRFAP1L1Q96HT8 127 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 NBPF3Q9H094 633 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 SENP2Q9HC62 589 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 CPDO75976 1380 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 CTIFO43310 598 aaKnown RBP16.88■□□□□ 0.29
HDAC9-208ENST00000417496 APPP05067 770 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 LDHAL6AQ6ZMR3 332 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 CEP57L1Q8IYX8 460 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 NCOA7Q8NI08 942 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 GREM2Q9H772 168 aa16.88■□□□□ 0.29
HDAC9-208ENST00000417496 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 CCDC69A6NI79 296 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 SPTLC2O15270 562 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 CDC25BP30305 580 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 SLC9C2Q5TAH2 1124 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC9-208ENST00000417496 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 TJP1Q07157 1748 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
HDAC9-208ENST00000417496 KIAA1468Q9P260 1216 aa16.87■□□□□ 0.29
HDAC9-208ENST00000417496 UBE2Q2LH0YL09 131 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 IDH1O75874 414 aaKnown RBP16.86■□□□□ 0.29
HDAC9-208ENST00000417496 ITGA6P23229 1130 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 HSPA2P54652 639 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 TMOD3Q9NYL9 352 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 NEDD4P46934 1319 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
HDAC9-208ENST00000417496 NCBP1Q09161 790 aaKnown RBP16.86■□□□□ 0.29
HDAC9-208ENST00000417496 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
HDAC9-208ENST00000417496 CYB5R4Q7L1T6 521 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 NBPF11Q86T75 865 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 FBXL16Q8N461 479 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 PHKBQ93100 1093 aa16.86■□□□□ 0.29
HDAC9-208ENST00000417496 WDHD1O75717 1129 aaPredicted RBP16.85■□□□□ 0.29
HDAC9-208ENST00000417496 ZNF202O95125 648 aa16.85■□□□□ 0.29
HDAC9-208ENST00000417496 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms