RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 HDXQ7Z353 690 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 CCDC83Q8IWF9 413 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 DHX40Q8IX18 779 aaKnown RBP7.39□□□□□ -1.23
CCNT1-202ENST00000417344 HNRNPLLQ8WVV9 542 aaKnown RBP7.39□□□□□ -1.23
CCNT1-202ENST00000417344 SPATA32Q96LK8 384 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 NBPF4Q96M43 638 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 GNL3LQ9NVN8 582 aaKnown RBP7.39□□□□□ -1.23
CCNT1-202ENST00000417344 NSD2O96028 1365 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 USP32Q8NFA0 1604 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 SPHKAPQ2M3C7 1700 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 KLHL33A6NCF5 533 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 LARGE1O95461 756 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 TXLNAP40222 546 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 SH3D19Q5HYK7 790 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 VPS53Q5VIR6 699 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 CNNM3Q8NE01 707 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 BICD2Q8TD16 824 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 GOLGA1Q92805 767 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 FAXDC2Q96IV6 333 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 PLEKHA4Q9H4M7 779 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
CCNT1-202ENST00000417344 H0YHG0 523 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 ELL2O00472 640 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 N4BP1O75113 896 aaKnown RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 ERCC3P19447 782 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 SSR1P43307 286 aaKnown RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 LIG3P49916 1009 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 GNAI1P63096 354 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 SARNPP82979 210 aaKnown RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 PSME1Q06323 249 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 NEDD9Q14511 834 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 HSP90B2PQ58FF3 399 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 BEND6Q5SZJ8 279 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 TSHZ3Q63HK5 1081 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 RDH13Q8NBN7 331 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 FAM71BQ8TC56 605 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 JPH2Q9BR39 696 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-202ENST00000417344 TRAK1Q9UPV9 953 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 SNX14Q9Y5W7 946 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 ABCA6Q8N139 1617 aa7.38□□□□□ -1.23
CCNT1-202ENST00000417344 HMMRO75330 724 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 ELF1P32519 619 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 USP46P62068 366 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 IRX1P78414 480 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 CFAP70Q5T0N1 1121 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 FBXW10Q5XX13 1052 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 LARP1BQ659C4 914 aaKnown RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 FAM173BQ6P4H8 233 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 CDC37L1Q7L3B6 337 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 TMC6Q7Z403 805 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 FERMT3Q86UX7 667 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 LEO1Q8WVC0 666 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 DDX11Q96FC9 970 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 MPHOSPH8Q99549 860 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 SH2B1Q9NRF2 756 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 HYPKQ9NX55 129 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 MRFAP1Q9Y605 127 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 MAST1Q9Y2H9 1570 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 SALL3Q9BXA9 1300 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 KIAA1210Q9ULL0 1709 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 EXOC5O00471 708 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 CTAGE5O15320 804 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 NEBLO76041 1014 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 IFIT2P09913 472 aaKnown RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 GPTP24298 496 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 SCRN1Q12765 414 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 TWISTNBQ3B726 338 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 NBPF9Q3BBW0 867 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 CPLX2Q6PUV4 134 aaKnown RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 CALR3Q96L12 384 aaKnown RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 ZSCAN31Q96LW9 406 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 PLCD4Q9BRC7 762 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 VEZTQ9HBM0 779 aa7.37□□□□□ -1.23
CCNT1-202ENST00000417344 BSDC1Q9NW68 430 aaPredicted RBP7.37□□□□□ -1.23
CCNT1-202ENST00000417344 URB2Q14146 1524 aaKnown RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 COL3A1P02461 1466 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 SOWAHBA6NEL2 793 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 DTNBO60941 627 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 ERLIN1O75477 346 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 GCFC2P16383 781 aaKnown RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 USP5P45974 858 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 DDR1Q08345 913 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 ZKSCAN8Q15776 578 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 NAIF1Q69YI7 327 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 TICAM2Q86XR7 235 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 FMNL3Q8IVF7 1028 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 CEP57L1Q8IYX8 460 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 PGBD1Q96JS3 809 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 NAT10Q9H0A0 1025 aaKnown RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 IL25Q9H293 177 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 FAM204AQ9H8W3 233 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 ANO10Q9NW15 660 aa7.36□□□□□ -1.23
CCNT1-202ENST00000417344 TFIP11Q9UBB9 837 aaKnown RBP7.36□□□□□ -1.23
CCNT1-202ENST00000417344 MCM8Q9UJA3 840 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms